Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00043 ATGATGAACTGCCCAACATGGAAAACCATGGCAATGACTATTGTGTTTCTTCAGCTGAGTTTTTCCTTGGAGATCTTCTGCCTCTCTTCTCATGCAGATGCAGATAGAATTGTTCAGCTTCCTGGGCAACCCCACATAGGCTTTCAACAGTTCTCAGGATATGTCACAGTGGATGACATAAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCTGCTTCAAAGCCTTTAGTCCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGAGCATTCTCTGAAAATGGACCTTTCAGACCCAACGGGGAAGTTCTGATTAAAAATGAGTATAGTTGGAACAAAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTGAAGGTAGCTCCTCCTATGTGGCGGTGAATGATGAGACAACTGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATACAGACACACAGATTTGTTTCTAACAGGGGAAAGTTATGCAGGCCATTATGTACCACAACTTGCAAAACTCATGCTTGAAATCAACAAAAAGGAGAAGATATTTAATCTGAAAGGCATAGCCTTGGGTAACCCAGTTCTAGAATATGCCACTGACTTCAATTCCAGGGCTGAATTCTTCTGGTCTCACGGATTAATATCAGATTCAACGTACAAAATGTTCACTAGAGGTTGTAATTATTCACGGTACGTCAGTGAATACTATAGAGACTCAGTTTCACCGCTTTGTTCAAAGGTTATGGGCCAAGTTAGCAGAGAAACTAGTAAGTTTGTGGATAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCCAAAGTTATTTGTCCTCAAAGCCAAAAAGCAAATGAGAGTATAGATGTTTGTGTAGATGACAAAGTTACAAATTACTTAAACCGACAAGATGTACAGGAGATGCTCCATGCCAAGCTTGTTGGAGTTCGAAAGTGGGATGTGTGTAGCAACATCCTGGACTATGATATGCTCAACCTGGAAGTTCCTACACTCCCTATTGTTGGAACACTCATAAAAGCTGGAGTTAGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTGATTCCACTGACTGGAAGCCGCACGTTGGTTCAAAAGCTGGCAAGACAATTAGGACTGAATACAACAGTTCCTTATAGGGTGTGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCGAGTTTATGGCAACATCCTCACCTTTGCAACCGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCGCAGCCTGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGGCAGGCCTCTACCTGAAATTTTCTGA 1407 0.4257 MMNCPTWKTMAMTIVFLQLSFSLEIFCLSSHADADRIVQLPGQPHIGFQQFSGYVTVDDIKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNKETNMLYLETPVGVGFSYAEGSSSYVAVNDETTARDNLVFLQRWFNKFPQYRHTDLFLTGESYAGHYVPQLAKLMLEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTRGCNYSRYVSEYYRDSVSPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQSQKANESIDVCVDDKVTNYLNRQDVQEMLHAKLVGVRKWDVCSNILDYDMLNLEVPTLPIVGTLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTRVYGNILTFATVRGASHEAPFSQPERSLVLFKSFLEGRPLPEIF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00043 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 448 IPR001563 GO:0004185|GO:0006508
Gabi2476g00043 468 Pfam Serine carboxypeptidase 45 461 IPR001563 GO:0004185|GO:0006508
Gabi2476g00043 468 SUPERFAMILY alpha/beta-Hydrolases 39 465 IPR029058 -
Gabi2476g00043 468 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Gabi2476g00043 468 Gene3D - 362 461 - -
Gabi2476g00043 468 Gene3D alpha/beta hydrolase 31 293 IPR029058 -
Gabi2476g00043 468 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Gabi2476g00043 468 FunFam Carboxypeptidase 30 465 - -
Gabi2476g00043 468 FunFam Carboxypeptidase 362 461 - -
Gabi2476g00043 468 Gene3D - 316 352 - -
Gabi2476g00043 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Gabi2476g00043 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Gabi2476g00043 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Gabi2476g00043 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00043 Gabi-Chr2476 334180 336917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00043 324 464 Calmodulin-binding Proteins AT2G22960 29.078 1.10e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00043 K16297 - gmx:100800002 875.544