Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00039 ATGGCTCCTTCTGACCAATCTCGTCATTCTCTTGTCCCTGGATTCCTATACTCATCAAAAACAACCTCCCATTTGGATGCTTTGAGGAATACCAATCATGGGTTGCCACCATCTACCACCACCTCCTCCATTATATCACATTTATCATCATCATCATCATCATCACCATCACAGGGTAGCACTAGGAGTCCTATGATCCCTGCACCCAAAGAGAGTATTCGCATGTTTTCTCCTGCTTACTACGCTGCATGCAGTGCCGGTGGCATCTTCAGTTGTGGTCTTACCCACATGGCCGTTACTCCTCTTGATCTTGTCAAGTGCAATATGCAGATTGACCCTGTAAAGTATAAGAACATTACATCAGGATTTGGAGTTTTACTGAAGGAGCAGGGTGTTAAAGGTTTCTTCAGGGGCTGGGTACCAACTTTGTTTGGTTACAGTGCTCAGGGAGCGTGCAAGTTTGGATTTTATGAGTTCTTCAAGAAGTATTACTCAGATCTTGCAGGACCAGAGAATGCAGCCAAGTACAAAACTTTCATATATCTAGCTGGTTCTGCTTCAGCAGAAGTTATTGCTGATATTGCCCTTTGCCCAATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTAGAGGTTTATCAGATGGGTTACCTAAGTTTGTCAAGGCTGAGGGTGCTGCTGGGTTGTATAAAGGAATAGTTCCTCTTTGGGGCCGTCAGATTCCATACACAATGATGAAATTTGCTTCCTTTGAGACTATTGTGGAGATGATATACAAAAACGTCATACCAATCCCTAAAGAAAAGTGCAGCAAAAAAGAGCAGCTTGGAGTGAGTTTTGCGGCAGGATATGTGGCTGGTGTACTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAACTCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGTTTAATGGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACTCTAACTGGAGCTCAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGACTGCCTACTAGCGGTGGAAGTGCTCCTGCACCTGCGAAGTAG 1116 0.4462 MAPSDQSRHSLVPGFLYSSKTTSHLDALRNTNHGLPPSTTTSSIISHLSSSSSSSPSQGSTRSPMIPAPKESIRMFSPAYYAACSAGGIFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGVKGFFRGWVPTLFGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTFIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFVKAEGAAGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKNVIPIPKEKCSKKEQLGVSFAAGYVAGVLCAIVSHPADNLVSFLNNSKGATVGDAVKKIGLMGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGSAPAPAK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00039 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 277 356 IPR018108 -
Gabi2476g00039 371 Pfam Mitochondrial carrier protein 82 165 IPR018108 -
Gabi2476g00039 371 Pfam Mitochondrial carrier protein 177 264 IPR018108 -
Gabi2476g00039 371 Gene3D Mitochondrial carrier domain 80 357 IPR023395 -
Gabi2476g00039 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 176 260 IPR018108 -
Gabi2476g00039 371 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 52 367 IPR044677 GO:0005315|GO:1990547
Gabi2476g00039 371 MobiDBLite consensus disorder prediction 27 67 - -
Gabi2476g00039 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 163 IPR018108 -
Gabi2476g00039 371 MobiDBLite consensus disorder prediction 27 65 - -
Gabi2476g00039 371 FunFam Phosphate carrier protein, mitochondrial 79 357 - -
Gabi2476g00039 371 SUPERFAMILY Mitochondrial carrier 81 351 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00039 Gabi-Chr2476 299443 302123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00039 5 370 Chloroplast and Mitochondria Gene Families AT5G14040 74.194 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00039 K15102 - gmx:100800530 622.854