Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00020 ATGGTGAACGTTCCAAAGACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAAGAAGCACACTTTGCACAAGGTTACTCAATACAAGAAGGGTAAAGATAGCATTGCTGCTCAAGGAAAACGCCGTTATGATCGGAAACAGTCCGGTTATGGTGGACAGACTAAGCCTGTCTTCCACAAGAAGGCAAAAACCACCAAGAAAATTGTTTTGAGGTTGCAATGCCAGGGTTGCAAGCATGTCTCCCAACATGCAATCAAGAGGTGCAAGCATTTTGAGATTGGTGGCGACAAGAAGGGGAAAGGAACCTCTCTTTTCTAA 318 0.4434 MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00020 105 Gene3D - 1 105 - -
Gabi2476g00020 105 FunFam 60S ribosomal protein L44 1 105 - -
Gabi2476g00020 105 MobiDBLite consensus disorder prediction 28 56 - -
Gabi2476g00020 105 Pfam Ribosomal protein L44 19 94 IPR000552 GO:0003735|GO:0005840|GO:0006412
Gabi2476g00020 105 ProSitePatterns Ribosomal protein L44e signature. 63 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Gabi2476g00020 105 SUPERFAMILY Zn-binding ribosomal proteins 2 94 IPR011332 GO:0006412
Gabi2476g00020 105 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 1 105 IPR000552 GO:0003735|GO:0005840|GO:0006412
Gabi2476g00020 105 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00020 Gabi-Chr2476 170801 171876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00020 1 105 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 92.381 1.82e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00020 K02929 - ming:122075852 214.157