Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00018 ATGGCACCCTTTGTTTTGGCTTTCCTATTCTTATTCTTAATGGGGAGTTCCAAGGGACAGCTTCAAGTGGGTTTCTACTCAAACACATGTCCTCAAGTTGAGTCCACTGTCCATGCCGTTGTTAGAGACGCTGTTGTCTCTGACCCCAACATTGCTGCTGTCTTGCTCAGGCTTCATTTCCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATCGACAATGGTCCAAAATCGGAGAAATTAGCAGTTGGACATCAAGGGGTTAGAGGGTTTGATGTGATAGAAAAAGCCAAGGCACAACTAGAAGCGTCTTGTCCAGGCGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGACGCAATAATCATGGCAAATGGGCCAGGATACCAAGTTCCAACAGGGCGGAGAGATGGGTTGGTTTCCGATCTTTCACTTGCAAGAGACATGCCAGATGTTAGTGACTCAATTCAACTACTCAAGGCCAAGTTTCTGAACAAGGGTCTCACAGAGAAAGACCTTGTCCTTCTCAGTGCTGCCCATACAATTGGAACCACAGCTTGCTTCTTCATGACCAAAAGACTTTACAACTTTTTCCCAGCTGGTGGAGGATCAGACCCAGCTATTAGCCCAAACTTTCTCCCAGAGTTGAAGGCAAAGTGCCCTCAGAATGGAGATGTTAACACACGTTTAGCCATGGATGAAGGGAGTGAGCAGAAATTTGACATACACATTTTGAAGAACATAAGGGAAGGTTTTGCTGTGCTAGAATCTGATGCCAGGCTTAATGATGACATGGGGACCAAGGGTGTCATTGACTCCTACTTTGGTCCCCTCAATCAATTTTTTGAAAATTCTTTTGAAGCTGATTTTATTGAGTCAATTGTGAAGATGGGCCAAATTGGAGTCAAGACAGGTTTCCTTGGAGAGATTAGACGCGTGTGCTCATCAGCCAATTGA 969 0.452 MAPFVLAFLFLFLMGSSKGQLQVGFYSNTCPQVESTVHAVVRDAVVSDPNIAAVLLRLHFHDCFVEGCDGSILIDNGPKSEKLAVGHQGVRGFDVIEKAKAQLEASCPGVVSCADIVALAARDAIIMANGPGYQVPTGRRDGLVSDLSLARDMPDVSDSIQLLKAKFLNKGLTEKDLVLLSAAHTIGTTACFFMTKRLYNFFPAGGGSDPAISPNFLPELKAKCPQNGDVNTRLAMDEGSEQKFDIHILKNIREGFAVLESDARLNDDMGTKGVIDSYFGPLNQFFENSFEADFIESIVKMGQIGVKTGFLGEIRRVCSSAN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00018 322 FunFam Peroxidase 154 301 - -
Gabi2476g00018 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 FunFam Peroxidase 24 166 - -
Gabi2476g00018 322 CDD secretory_peroxidase 20 319 IPR033905 GO:0004601|GO:0042744
Gabi2476g00018 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Gabi2476g00018 322 Gene3D Peroxidase, domain 2 154 301 - -
Gabi2476g00018 322 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 SUPERFAMILY Heme-dependent peroxidases 20 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 Gene3D - 24 322 - -
Gabi2476g00018 322 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Gabi2476g00018 322 PANTHER PEROXIDASE 25-RELATED 9 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 ProSiteProfiles Plant heme peroxidase family profile. 20 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2476g00018 322 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00018 Gabi-Chr2476 158109 160844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00018 1 322 Peroxidase AT1G77100 56.173 3.31e-120 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00018 K00430 - gmx:547549 530.791