Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00003 ATGAAGGATATGTGCAATGCAGTTCAGGGGTTGAAGCCAACGCTGCTGATGGTTGTGGTGCAGATTTCATTTGCTGGGTTGAATGTGCTCTACAAGCTTGCCGTAAACGATGGCATGAACTTGAGGATTGTTGTTGCGTACCGCTTTATATTCGCAACTGCTTTCATAGCTCCACTTGCTCTCATTGTTGAAAGAAAGAAGAGAGCAAAGATGACATGGACGATAATGTTTCAGTCATTTCTGAGCGGATTATTTGGAGGAGTATTAGCTCAAAACTTCTACTTAGTGGCCTTGGCTTTAACTTCTGCAACGTTTGCATCCGCCATGTCCAACCTTACACCAGCCATTACCTTTATCATGGCCGTTTCCTTTGGTTTGGAAAGATTAAATTTGAGAACAAGAGCAGGGAAGGCCAAGATTCTGGGCACATTAACAGGAATTGGTGGGGCAATGGTACTAACTTTCGTTAAAGGTGTGGAAATCAAGATGGGGTCCTTCCACGTAAACCTTTTGCATCACCAAAACGGTGCGTATCATCACGCTAGTGCTGGTGGTAAGACCATCTTGGGTGCTCTATGCGTCCTGGCAAGTTGCATCTCTTATGCTTTGTGGCTCATCATTCAGGCAAAGATGAGTAAAACTTACCCTAGTCATTACTCAAGCACCGCGTTGATGTCTCTATGGGGGTCTCTGTTATCAACTGTGTTTGCTCTTTGCCTTGAGAGGGATTGGAATCAGTGGAGGTTGGGTTGGAATATTAGGCTTCTAACCGTAGCTTATTCGGGTATGGTGGTTTCTGGAGTGATGGTGGCAGTGATTTCATGGTGTATACTCATGAGAGGCCCATTGTTTGCCTCTGTTTTTAGCCCTCTAGTGCTTGTGATGGTGGCCTTGGCTGGTTCTATGATGTTGAACGAGCAGCTACATCTCGGATGCATCATTGGAGCAGTGTTGATTGTGTGTGGCTTATACGTGGTTCTATGGGGTAAAAGCAAAGAGATGCAAAAGAAGAATCAATTAGTACCATCACAAAGCCCCCATGAATCTAATACAGTCGAAATAGTTGTCAGGTCTTCAATAGAAGATAAAAGCAACCACAATAACAACAATACCCACGATAATGCTGCAAATGTGGTTAGGGATAATGAAGATTTATCAGCAGATAATGGACATGAAGAGCATGGTGCACATGTACACAATTAG 1203 0.4381 MKDMCNAVQGLKPTLLMVVVQISFAGLNVLYKLAVNDGMNLRIVVAYRFIFATAFIAPLALIVERKKRAKMTWTIMFQSFLSGLFGGVLAQNFYLVALALTSATFASAMSNLTPAITFIMAVSFGLERLNLRTRAGKAKILGTLTGIGGAMVLTFVKGVEIKMGSFHVNLLHHQNGAYHHASAGGKTILGALCVLASCISYALWLIIQAKMSKTYPSHYSSTALMSLWGSLLSTVFALCLERDWNQWRLGWNIRLLTVAYSGMVVSGVMVAVISWCILMRGPLFASVFSPLVLVMVALAGSMMLNEQLHLGCIIGAVLIVCGLYVVLWGKSKEMQKKNQLVPSQSPHESNTVEIVVRSSIEDKSNHNNNNTHDNAANVVRDNEDLSADNGHEEHGAHVHN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00003 400 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi2476g00003 400 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Gabi2476g00003 400 PANTHER WAT1-RELATED PROTEIN 13 339 IPR030184 GO:0016020|GO:0022857
Gabi2476g00003 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 332 - -
Gabi2476g00003 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00003 Gabi-Chr2476 37171 42053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00003 1 350 Nodulin-like Gene Family AT1G68170 47.429 1.94e-104 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00003 - - gmx:100787839 591.267