Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00002 ATGAAGAATATGTGGAACATAGTGCATGCATTGAAGCCAGCGCTGCTAATGGTGTTGGTGCAGATTGCAAATGCTTGGGTCAATGTGCTCTACAAGCTCGCCGTAAACGATGGCATGAACTTGAGGGTGATTGTTGCCTATCGCTATGTTTTCGCAACTGTTTTCATAGCTCCACTTGCTCTCATTATTGAAAGGAAGACGAGGACAAAGATGACTTGGACAATACTGTTTCAGGCATTTCTGTGCGGCTTAATTGGCGGAGCATTGCCTCAAAATTTAAACATGGAAGCGCTTGCCTTAACTTCCGTAACGTTTACAACCGCAATATCAAACCTCATTCCAGCCATCACCTTTATCATATCCCTCTCCTTGGGTTTGGAAAGATTGAATTTAAGAACAACAGCAGGGAAGGCCAAGATAATTGGAACAGTGACTGGAATTGGGGGGGCAATGGTACTGACTTTCGTTAAAGGCAAGGAAGTTGATATGCTGTCGTTCCACATAAACCTTTTCAATAACCAAAACGGCCACGTCGTACACACACATGCTAGCTCTGGTCTTATGACCATATTGGGGGCTCTCTCCTCTTTAGCCAGCAATGTCTCTTATGCTCTGTGGTTCATCATTCAGGCAAAGATGAGTGAAAGATACCCATGTCCTTATTCAAGCACAGCTTTGATGTCTCTAATGGGAGCACTGTTATCCATTTCGTTTGCTTTTTGCCTCGAGAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATGTTAGGCTATTAACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTAGCTGTGATTTCGTGGTGTATACAAATGAGAGGCCCATTATTTGTGTCCGTTTTCAGCCCTCTAATGCTTGTAGTTGTGGCCTTTGCTGGATCCACGATTTTGGACGAAAAGCTATACGTGGGCAGCATCATTGGATCAGTGTTGATTATTTGCGGATTATACGTAGTTCTATGGGGTAAAAGCAAGGAGATGAAGAAGAATCATCTGGTGCCATCAGAAAGAACCCATGAATCCGACCCAGTTCAAATAATCGTCAAGTCTCAAGTTGAAGATAAAACCAACCATAAGAACAATACCCTTAATAATGCAGCAAATGCAGTTAGGGGTAATGAAGATTCATTAGAAAATGGAGGTAATAAGCATGTTACACATACACACTATAAAGGGAAAGAAGAAGAAGAAGTAATATATCGGAATGCCTCACATACCTAA 1248 0.4255 MKNMWNIVHALKPALLMVLVQIANAWVNVLYKLAVNDGMNLRVIVAYRYVFATVFIAPLALIIERKTRTKMTWTILFQAFLCGLIGGALPQNLNMEALALTSVTFTTAISNLIPAITFIISLSLGLERLNLRTTAGKAKIIGTVTGIGGAMVLTFVKGKEVDMLSFHINLFNNQNGHVVHTHASSGLMTILGALSSLASNVSYALWFIIQAKMSERYPCPYSSTALMSLMGALLSISFAFCLERDLSQWRLGWNVRLLTVAYAGIVVSGVMVAVISWCIQMRGPLFVSVFSPLMLVVVAFAGSTILDEKLYVGSIIGSVLIICGLYVVLWGKSKEMKKNHLVPSERTHESDPVQIIVKSQVEDKTNHKNNTLNNAANAVRGNEDSLENGGNKHVTHTHYKGKEEEEVIYRNASHT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00002 415 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Gabi2476g00002 415 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Gabi2476g00002 415 PANTHER WAT1-RELATED PROTEIN 12 344 IPR030184 GO:0016020|GO:0022857
Gabi2476g00002 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 334 - -
Gabi2476g00002 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00002 Gabi-Chr2476 22745 29404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00002 1 338 Nodulin-like Gene Family AT1G68170 47.041 3.56e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00002 - - gmx:100810120 659.448