Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2476g00001 ATGAGAGATATAAGGAAAGTAATGCATGGGTTGAAGCCAGCCCTGTTGATGTTGGTGGTGCAGATTGTATTTGCTTCGGCGAATGTGCTCTATAAGGTTGCCATAAACGATGGAATGAGCGTTAGAGTAGTTACTGCTTACCGTCTTATTTTTGCAGCAGCATGCACTGTTCCACTTGCTCTTATTCTTGAAAGGAAGAACAGACCAAAACTGACTTGGAGGGTGGTTTTTATGTCATTTTTTTGTGGCCTATTTGGGGGAAGTTTATTCCAAAACCTTTACTTCGAGTCCTTGGCATTGATATCAGCAACATTTGCTTCGGCGGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGCTGTCGTCTGCGGTTTCGAAAGATTAAATTTGCAAACGATAGCAGGCAAGACTAAGGTGTTAGGAACGATAACAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATTAACATTTGGACCTTCCACATTAACCTTTTGCATAAAAATGGCCACAAGGGAACACTAAATGGTGACTCTGGTAGTAAATTGCTTGGTATTTTTTGTGGTCTTGGAAGCTGCTTCTGTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATACCCAAGATATCTCTCGAGTACAGCTTTGATGTCCTTAATGGGGGCAATACAAGCTACTGTTTTTGCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAACATTAGGCTTCTCACAGCAGCATATTCGGGTATTGTGGCCTCTGGAATAATGGTTGTTGTCATTGCATGGTGTGTCAGGATGAGAGGCCCATTGTATGCCTCTGTTTTCAACCCTCTAATGCTTGTGCTTGTTGCCATTGCTGGTTCCTTAATGTTGAATGAAAACCTATACTTAGGAAGTGTAATTGGAGCAGTGCTAATTGTGATTGGATTGTACATGGTGCTGTGGGGTAAGAGTAAAGAAATGAAAAAGGTGACTCACTTAGAAATCACTTCAGAAATTGAGGTTGTTATCACATCCACGACAGTAGATCATGACAAAGGTAACTGCAGCAGCAACAACCATTCCTGTAGTGAGGGCAATATTGTTGGCAAAGATAAAGATAATTCATCAAAAACTGAATATGAAGAACAAGACACCGAGAATAACGGAAAAGAAGAAGTGGCTAACAAGGAGGTAGAACCATAA 1224 0.415 MRDIRKVMHGLKPALLMLVVQIVFASANVLYKVAINDGMSVRVVTAYRLIFAAACTVPLALILERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVVCGFERLNLQTIAGKTKVLGTITGVGGAMMLTFLKGVEINIWTFHINLLHKNGHKGTLNGDSGSKLLGIFCGLGSCFCFALWLIIQAKMSKEYPRYLSSTALMSLMGAIQATVFALCVEKDWSQWRLGWNIRLLTAAYSGIVASGIMVVVIAWCVRMRGPLYASVFNPLMLVLVAIAGSLMLNENLYLGSVIGAVLIVIGLYMVLWGKSKEMKKVTHLEITSEIEVVITSTTVDHDKGNCSSNNHSCSEGNIVGKDKDNSSKTEYEEQDTENNGKEEVANKEVEP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2476g00001 407 Pfam EamA-like transporter family 12 136 IPR000620 GO:0016020
Gabi2476g00001 407 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi2476g00001 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
Gabi2476g00001 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 138 - -
Gabi2476g00001 407 MobiDBLite consensus disorder prediction 373 407 - -
Gabi2476g00001 407 MobiDBLite consensus disorder prediction 360 407 - -
Gabi2476g00001 407 PANTHER WAT1-RELATED PROTEIN 12 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2476g00001 Gabi-Chr2476 6957 8889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2476g00001 11 380 Nodulin-like Gene Family AT1G25270 40.541 7.57e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2476g00001 - - gmx:100798755 518.079