Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2469g00020 ATGGCTCGTGAGAACTTAGGGGTGCTTAATGCACTCGATGCAGCCAAAACACAAATGTACCATTTCACTGCTATTGTCATAGCTGGTATGGGATTCTTCACAGATGCATATGATCTTTTCACCATACCAAATGTTACCAAGTTGCTTGGTAGAATATACTACACAGTTGAAGGTGCTCCAAAGCCAGGAACACTGCCTCCAAATGTGTCTGCTGCAGTGAATGGTGTTGCACTTTGTGGCACACTAGCAGGCCAACTTTTCTTTGGTTGGCTTGGAGACAAAATGGGAAGGAAAAAGGTTTATGGCCTAACACTTGCCCTTATGGTTGTGTCCTCTATTGCATCTGGCCTTTCTTTTGGCCATACTCCAAAGAGTGTCATATCCACACTATGTTTCTTCAGGTTCTGGCTTGGATTTGGCATTGGTGGTGATTACCCTCTCTCTGCCACCATCATGTCTGAATATGCAAACAAAAGGACTCGTGGGGCATTCATAGCTTCAGTTTTTGCTATGCAAGGCTTCGGAATCTTGGTTGGTGCTGTTGTTTCCATCATAGTTGCAACTGCATTCAATCATGCATACAAGGCTCCATCATATGCAGTTAACGCTGCAGCATCACTTGTGCCTCAAGCTGATTATGTTTGGCGCATAATTTTGATGTTTGGTGCTGTACCTGCTGCTCTTACTTACTACTGGCGCATGCAAATGCCTGAGACAGCAAGGTACACAGCACTTGTTGCCAAGAATGGAAAACAAGCAGCACTAGATATGTCAAAGGTGTTGCAAGTTGAAATTATAGCTGAGCAAGAAAAGGTAGATGCGATATCCATAAGAGATGACAACAATTTTGGTTTGTTTAGCAAGGAATTTGCACGCAGACATGGACTTCACTTGCTTGGAACCTGCGCATGTTGGTTCCTTCTTGATATTGCATATTACAGTTCAAACCTTTTCCAAAAAGACATTTACTCTAACATTGGGTGGCTCCCTCCAGCAAAAGACATGAATGCAATTCAAGAGGTTTACAAGGTTGCTAGAGCAACAGCACTTATAGCACTCTGTGGTACTGTTCCAGTTTTCATGTTTGCACTTGCTCTTCCATATAATCACTGGTCACAGAAAAGTCACAGAATTGGGTTTCTTGTTATGTATGCATTGACCTTCTTCTTTGCAAATTTTGGTCCAAACTCAACCACTTTTGTTGTGCCTGCTGAAATTTTCCCTGCAAGGTTGAGGTCAACATGCCATGGTATATCCGCAGCTGCAGGGAAAGCTGGAGCAATTATTGGTGCATTTGGATTCTTATATGCTTCACAAGACAAGGATCGAACAAAGAGAGATGCAGGGTACCCTGCTGGTATTGGGATGAAGAACACTCTTATTGTGCTTGCTGTGGTTAATTGTCTTGGCATATTTTTCACTTTGTTGGTGCCAGAATCAAATGGAAAATCATTGGAGGAGTTGAGTAGAGAGAATGAAGATGAAGGTGGTGATGAGATTACTGAGCAGCAAGCCACTACTAGCAGGACTGTTCCAGTTTGA 1542 0.4287 MARENLGVLNALDAAKTQMYHFTAIVIAGMGFFTDAYDLFTIPNVTKLLGRIYYTVEGAPKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLALMVVSSIASGLSFGHTPKSVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIASVFAMQGFGILVGAVVSIIVATAFNHAYKAPSYAVNAAASLVPQADYVWRIILMFGAVPAALTYYWRMQMPETARYTALVAKNGKQAALDMSKVLQVEIIAEQEKVDAISIRDDNNFGLFSKEFARRHGLHLLGTCACWFLLDIAYYSSNLFQKDIYSNIGWLPPAKDMNAIQEVYKVARATALIALCGTVPVFMFALALPYNHWSQKSHRIGFLVMYALTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYASQDKDRTKRDAGYPAGIGMKNTLIVLAVVNCLGIFFTLLVPESNGKSLEELSRENEDEGGDEITEQQATTSRTVPV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2469g00020 513 Pfam Sugar (and other) transporter 26 490 IPR005828 GO:0016020|GO:0022857|GO:0055085
Gabi2469g00020 513 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 485 - -
Gabi2469g00020 513 MobiDBLite consensus disorder prediction 486 513 - -
Gabi2469g00020 513 FunFam Probable inorganic phosphate transporter 1-5 20 256 - -
Gabi2469g00020 513 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 482 IPR020846 GO:0022857
Gabi2469g00020 513 Gene3D MFS general substrate transporter like domains 274 362 IPR036259 -
Gabi2469g00020 513 Gene3D MFS general substrate transporter like domains 20 268 IPR036259 -
Gabi2469g00020 513 Gene3D MFS general substrate transporter like domains 363 506 IPR036259 -
Gabi2469g00020 513 SUPERFAMILY MFS general substrate transporter 12 491 IPR036259 -
Gabi2469g00020 513 CDD MFS_PhT 25 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2469g00020 Gabi-Chr2469 302277 304195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2469g00020 1 513 Inorganic Solute Cotransporters AT2G32830 71.033 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2469g00020 K08176 - qsa:O6P43_021423 801.201