Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2469g00002 ATGGGTTATATATGTGATTTTTGTGGAAACCAGAGGTCCATGGTGTACTGCCGATCTGATGCTGCGTGCTTATGTTTGTCATGCGATCGAAATGTTCATTCCGCTAATGCCCTTTCCAGGCGTCATTCGCGGACTCTTTTATGCGAGAGATGTAATTCACAACCTGCCTTTGTAAGGTGTGCTGAAGAGAAAATTTCACTTTGCAAGAATTGTGATTGGTTAGGTCATGGTACCTCTACATCTTGTTCAACACATAATAGGCAACCAATCAGCTGCTATTCTGGCTGCCCTTCAGCGGCAGAACTGTCTTCTATGTGGTCATTTGTGTTGGATATCCCTTCATTGAGTGAATCTACATGTGAGCAAGAACTAGGATTAATGAGTATTAATGAGAACAGCAACAAGACTTCTTGGATTCCTCCAGAAAACCAGAATGCTTCTCGTTCAGATAAAGTTACTGATGCACCTGGTATGGATAAGTCTTGGGTTTGTACATCTTCAATGCCCGAGTCAAGCTCAGAACCTCGTATTCTGGACCAGCCAGCTGGACCTGCCAATGAATTTATGCCAAAGTTATACTGTCCTGCTACCAAATGCCCTGCACTATGTGAAGATGATGATCTGTATGCTGATTTCAACATGGATGAAGTGGATCTAAATCTTGAGAACTACGAAGAACTTTTTGGTATGTCCCTCAGTCATTCTGAGGAACTTTTTGAAAATGGTGGCTTTGATAGCTTGTTTGGGACAAAGGATATGTCTGCTGCAGATTCCAATTGTCAGGATGCTGTTGCTGCTGAGGGGTCATCAGTTGGACTGGTCAATCCATTGCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCCATATTGAGCACTAAAACTGAACCAGTTCTTTGTTTTACGGGAAGGCAAGCCCAATCAAACCTTTCTTTTACTGGCATTACTGCAGAGAATAATGCTGCAGAATCTCAAGATTGTGGGGCTTCTTCGACGCTTTTTATGGGAGAACCTCCTTGGTTTACTCCTTGTCCTGAGAATTCCCTACAATCTGCTAACCGCTGTAATGCTGTCATGCGTTATAAGGAAAAGAAGAAGACACGCAAGGGCCTAGATTTTCTTCAAGGAGGAAAAGGGGTGTAA 1143 0.4322 MGYICDFCGNQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPAFVRCAEEKISLCKNCDWLGHGTSTSCSTHNRQPISCYSGCPSAAELSSMWSFVLDIPSLSESTCEQELGLMSINENSNKTSWIPPENQNASRSDKVTDAPGMDKSWVCTSSMPESSSEPRILDQPAGPANEFMPKLYCPATKCPALCEDDDLYADFNMDEVDLNLENYEELFGMSLSHSEELFENGGFDSLFGTKDMSAADSNCQDAVAAEGSSVGLVNPLQPACSNAASADSILSTKTEPVLCFTGRQAQSNLSFTGITAENNAAESQDCGASSTLFMGEPPWFTPCPENSLQSANRCNAVMRYKEKKKTRKGLDFLQGGKGV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2469g00002 380 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Gabi2469g00002 380 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gabi2469g00002 380 CDD Bbox1_BBX-like 47 90 - -
Gabi2469g00002 380 MobiDBLite consensus disorder prediction 135 154 - -
Gabi2469g00002 380 CDD Bbox1_BBX-like 4 47 - -
Gabi2469g00002 380 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 368 - -
Gabi2469g00002 380 SMART bboxneu5 48 90 IPR000315 GO:0008270
Gabi2469g00002 380 SMART bboxneu5 4 47 IPR000315 GO:0008270
Gabi2469g00002 380 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2469g00002 Gabi-Chr2469 29240 34336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2469g00002 1 369 C2C2-CO-like Transcription Factor Family AT3G07650 50.262 4.03e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2469g00002 - - gmx:100800832 641.728