Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2467g00007 ATGGCAAAGAGGAAGAGCTGGTTTGGATGGTTGAAAAGGCTATTCACTTCTGAGTCAAAGGACAAATCTCTTCAGAAGGCAAAAAAATGGGGATGGAGTCTTGGAAGGATTAAGCAAACACAATATCCAAAAATTACAGCACCAAATAGGACATTGATTGAAGCAAGTGCTGAGCAGAGAAAACATGCTTTGACTGTGGCTATTGCAACAGCAGCTGCTGCAGAGGCTGCAGTTGCTGCTGCACATGCTGCTGCAGAGGTTGTCAAGCTCACAGGTGCTTCACGTTCTTATTCATATCTGTATAAAGGAGACCGAAGTTTTGCAGCCATCAAGATTCAAAGTGCTTATCGTGGACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAATTATAAGACTGCAAGCCATAGTTCGTGGTCAAGTTGTGAGACGTCAAGTGTCCAGAACTTTGAAGAATTTTCCCTCTGATGCAAGAAATCAGGTTGAAATTCATGAAAGAAGCATCCATAAGGCCTTAGAAAACTACAAAAATGAACATATTAAGCCATTTCCAAAGCAAAAGAAGTTAGAAGAGAAGGAACTGAAGCCTGAATGCCATAGTCAAAGAACTTGGGATTGTAGCTTGCACTCAAGAGAAGACATTGAAGCCATATGGTTAAGAAAGCAAGAGGCTATTGTCAAAAGAGAGCGCATGAAGCAATACTCTTCTTCACAAAAGGAGAGAAAAATTCCCCAAATCATGGAAGAATCTATGCACAACAAGGAATTTGGAAGAGAGAGTTGCCGTACACTAGGAGAGTGGCTACATAAAGAAACACATGATTGGGATATGCTTTATAAACCATCTCCTTTAAACATGATCACAATCAAAAAAGAATTGGAAGAAGAAGGATTGAGTTCACAAATTTCAATCCCAAGGAAATCATTTTCTCATGTAAAAATAAGTTCAGTTGGGGATGAAATTTCAATGCCAAATTCTCCATTTTTTCGTACATACATGGCTGTTACTGAATCTAGCAAAGCAAAGGAGAGGTCTATGAGCACACCAAGACAAAGAACAGGATTTGTGGATATAAGCTCAAATATGAGAGAGCCTCACAAAGAAGGCACTTCCTTTTGCTGTTCTTATTATGATGCAACTACCAGCACCAATGAAAACAATGAAAGTTCTCAGCATAAATGCCAGAGCTCAAATAGCCATTATTAG 1209 0.3945 MAKRKSWFGWLKRLFTSESKDKSLQKAKKWGWSLGRIKQTQYPKITAPNRTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASRSYSYLYKGDRSFAAIKIQSAYRGHLARKALRALKGIIRLQAIVRGQVVRRQVSRTLKNFPSDARNQVEIHERSIHKALENYKNEHIKPFPKQKKLEEKELKPECHSQRTWDCSLHSREDIEAIWLRKQEAIVKRERMKQYSSSQKERKIPQIMEESMHNKEFGRESCRTLGEWLHKETHDWDMLYKPSPLNMITIKKELEEEGLSSQISIPRKSFSHVKISSVGDEISMPNSPFFRTYMAVTESSKAKERSMSTPRQRTGFVDISSNMREPHKEGTSFCCSYYDATTSTNENNESSQHKCQSSNSHY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2467g00007 402 Gene3D - 105 154 - -
Gabi2467g00007 402 MobiDBLite consensus disorder prediction 383 402 - -
Gabi2467g00007 402 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Gabi2467g00007 402 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Gabi2467g00007 402 Pfam IQ calmodulin-binding motif 129 146 IPR000048 GO:0005515
Gabi2467g00007 402 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Gabi2467g00007 402 PANTHER IQ-DOMAIN 5-RELATED 4 382 - -
Gabi2467g00007 402 SMART iq_5 127 148 IPR000048 GO:0005515
Gabi2467g00007 402 SMART iq_5 104 126 IPR000048 GO:0005515
Gabi2467g00007 402 Pfam Protein of unknown function (DUF4005) 327 384 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2467g00007 Gabi-Chr2467 99422 102554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2467g00007 1 395 IQD Protein Family AT5G03960 42.961 8.23e-72 229