Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2465g00032 ATGGCAGCAGGGGCGATGAAGAATGAAGAATGTCTGAATCTAAAAATCACTGGTATAAGCCATGTGAAGCCTAACAAGAAAATTGGGAAGAAGGAGTATCAACTGGTCACGTTTGATCTTCCCTACCTATGTTTTTACTACAACCAGAAGCTACTTTTTTACAAAGGGGATGACTTTGAGGGAATGGTGAAGAAACTGAAAGATGGGCTTAGTGTGGTCTTGGAGGATTTCCATCAACTAGCTGGTAAGCTAGGGAAAGATGAAGAGGGGGTGTTCAGAGTAGAATATGATGATGACATGGCTGGTGTTGAGGTTACAGAGGCAGTTTCTGATGAGATTGAGGTAGCAGATCTAATTGTTTCTGAGAGTAACAACGTTTTGAAGGAGATGGTACCTTACAATGGGATCTTGAATTTTGAAGGGATGCATAGGCCCTTGTTGGCAGTTCAGTTGACCAAGATCAAAGACGGACTCGTAATAGGATGTGCATTCAACCACGGGGTGCTTGATGGGACCTCCACGTGGCACTTCATGACCTCATGGGCCGAGACATGCCGTGGCGCTCCTTCCACGTCAACTCCACCTTTCCTTGAACGGACCAAGGCCCGAAACACGTGCGTGAAGTACGACCTCCCTCCTCTTTCGGGCCCAACAACCTCAAGTAACGATGATGCGAAGCCCAAGCCTGGCCCACCACTGAGGGAAAAGATCTTCAGGTTCTCAGACTCAGCCATTGAGAAAATAAAGTCAACGGTCAATGAAACTGCGCCATCTGATGGCTCAAAACCATTCTCAACATTCCAGGCTCTCTCGGTTCATATTTGGCGCTATGTAAGCCATGCACGTAACCTTAAACCTGAAGACCACACAGTATTCACTGTCTTTGCAGATTGTCGGAAACGGGTTGACCCGCCAATGCCGGAGACTTACTTCGGAAACCTGATTCAAGCCATATTTACGGTGACTGCAGTCGGGTTATTGTGGGCCCAACCACCACAGTTTGGTGCTTCCATGATTCAGAAAGCGATTGAAGGACACAATGCGAAAGTCATTGATGAATTTAACAAAAGGTTGGAAAGTGCACCAAAGATATTTGAATTCAAAGATGCAGGGGTGAATAGTGTGGCTGTGGGAAGCTCACCAAGGTTTAAGGTTTACGATGTGGATTTTGGATGGGGGAAGCCAGAAAATGTTAGAAGTGGAAGCAATAACAAGTTTGATGGGATGATTTATTTGTATCCAGGGAAGAATGGTGGGAAGAGCATTGATGTGGAGCTAACCTTGGAATCTGAAGCTATGGGGAAATTGGAGCAAAATAAAGAATTTCTAATGGAGATTTAG 1341 0.4541 MAAGAMKNEECLNLKITGISHVKPNKKIGKKEYQLVTFDLPYLCFYYNQKLLFYKGDDFEGMVKKLKDGLSVVLEDFHQLAGKLGKDEEGVFRVEYDDDMAGVEVTEAVSDEIEVADLIVSESNNVLKEMVPYNGILNFEGMHRPLLAVQLTKIKDGLVIGCAFNHGVLDGTSTWHFMTSWAETCRGAPSTSTPPFLERTKARNTCVKYDLPPLSGPTTSSNDDAKPKPGPPLREKIFRFSDSAIEKIKSTVNETAPSDGSKPFSTFQALSVHIWRYVSHARNLKPEDHTVFTVFADCRKRVDPPMPETYFGNLIQAIFTVTAVGLLWAQPPQFGASMIQKAIEGHNAKVIDEFNKRLESAPKIFEFKDAGVNSVAVGSSPRFKVYDVDFGWGKPENVRSGSNNKFDGMIYLYPGKNGGKSIDVELTLESEAMGKLEQNKEFLMEI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2465g00032 446 Pfam Transferase family 15 442 - -
Gabi2465g00032 446 Gene3D - 216 439 IPR023213 -
Gabi2465g00032 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 20 443 - -
Gabi2465g00032 446 Gene3D - 11 210 IPR023213 -
Gabi2465g00032 446 MobiDBLite consensus disorder prediction 212 232 - -
Gabi2465g00032 446 FunFam Tryptamine hydroxycinnamoyl transferase 219 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2465g00032 Gabi-Chr2465 306233 308857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2465g00032 66 446 Monolignol Biosynthesis Gene Families AT5G48930 28.571 7.08e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2465g00032 K19747 - gmx:100818158 712.99