Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2465g00024 ATGCCTTCATGGTGGGGAAAATCGTCATCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATCGATACATTGCACCGAAAATTTAGAATTCCATCTGAAGGTAAAGTAAGCATTAGATCTGGAGGAACTCGTAGACATTGCAATGACACAATTTCAGAGAAGGGGGATTGTTCTCCTGCTGAATCAAGATCTCCATCACCTTCCAAAGTGGCAAGGTGCCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAATGTAGGCCGAGTAGATTCTGAAATTAGTATATCATCAAAATCGAGACTGGAAAAGGGCTCCAAGCCATCATTGTTTCTTCCGCTTCCAAAACCTGGATGCATACGTAGTAGGCCTAACCCTGCAGAGTTGGATGGAGATATGGTCACTGCTTCAGGCTTTAGTGATTGCTCAGCTGATAGTGATGAGCCGGCAGACTCACATAATCGTAGTCCTCTGGCAACTGACTCTGAGACAGGGACTAGAACTGCTGCTGGTAGTCCTTCCAGCTTGATACTCAAGAATCAATCATCTGCTTTTTCCCAACCGAATTCAAGAGAAGTCAAAACACCGGCAAACATTTTAAGTAATCATGTGTCTTCTACTTCACCAAAACGGAGGCCTTTACGCAATCATGTTCCAAATCTGCAGGTTCCTCCCCATGGTGCCTTCTATAGTGCTCCTGACAGTTCCTTGTCAAGTCCATCAAAAAGTCCATTGAGAGCATTTGGCACAGATCAAGTGTTGAACTCTGCTTTTTGGGCTGCAAAACCATATTCAGAGGTCAATTTAGCTGGATCTGGGCACTGCTCTAGTCCAGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTCACACCTATTCATCCTAGAGCTGGGGGAACACCCACTGAAACACAGACAGGATGGGTTGATGATGGAAAACAACAGAGTCATCGTTTACCCCTTCCTCCTTTGACAGTTACCAATTCCTCTCCTTTCTCTCATTCTAATTCTGCGGCAACATCTCCGTCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAACGAGTTCTGGCTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAAGTTACACTGCTTTCAGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGAAGTTCATTTATTAAGCCGTTTACGGCATCCAAATATCGTGCAGTATTATGGTTCTGACACAGTAGATGACAAACTTTACATATACCTCGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCTATTCGTTCTTATACTCAACAGATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAAATGGTCGGGTCAAGTTGGTAGACTTTGGCATGGCAAAACATATTTCAGGGAAATCATGTCCATTATCATTCAAGGGAAGCCCTTATTGGATGGCACCTGAGGTTATAAAGAACTCTAACGGATGCAACCTTGCTGTGGATATATGGAGTCTTGGATGTACAGTTTTAGAAATGGCTACAACTGAGCCTCCTTGGTATCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTACCACAAATCCCAGATCACCTCTCAAACGAGGGAAAAGATTTTGTTAGGAAATGTCTACAACGTAATCCACATGATCGCCCTTCAGCCAGTGAATTATTGGACCATCCTTTTGTAAAATGTGCTGCACCTTTGGAAAGACCCATATTTCCTGAAGCTTCGGACCCTGTTTCTGAGATTACACATGGAGTAAAAGCTCTGGGCATTGGACAAGGAAGGAATCTTTCTAACTTGGATTCAGATAGACTTTCTGTTCATTCTTCTAGGGTTTTGAAAACTAATCCTCACGAAAGTGAAATGCATATTCCAAGGAATATATCTTGCCCTGTATCTCCCATTGGAAGCCCACTTTTGAGGTCAATATCTCCACAGCACATGAATGGGAGACTGTCTCCTTCTCCAATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCACTGGTGGCAGTGGTGCCATTCCATTTAGTAATCACTTTAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAACATGCCATGGTCCTCAAATGGTGTGTACATTAATGGCCCTGCTCATCATGACTCAAATGGCATTGACATTTTTCGAGGTATGCAAATGGGGTCTCACATTACATCAGAACTGGCTTCCAGTGAAAATGATGTTCTGGGTAAGCAGTTTGCAAGGCATCCTCATGCAGAGTCATATGATTTTCAGTCAGTCTTGGCTGATCGTGTCGGCCGGCAGCTTCTGGGGGATCATGTTAAGATTAACCCAACCCTTGATCTAAGTCCAAAATCATCTTTGCTCAGCCGGGCAAATGGTTTATGA 2700 0.4381 MPSWWGKSSSKETKKKASKESFIDTLHRKFRIPSEGKVSIRSGGTRRHCNDTISEKGDCSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSNVGRVDSEISISSKSRLEKGSKPSLFLPLPKPGCIRSRPNPAELDGDMVTASGFSDCSADSDEPADSHNRSPLATDSETGTRTAAGSPSSLILKNQSSAFSQPNSREVKTPANILSNHVSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSKSPLRAFGTDQVLNSAFWAAKPYSEVNLAGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTETQTGWVDDGKQQSHRLPLPPLTVTNSSPFSHSNSAATSPSMPRSPARADNPTSSGSRWKKGKLLGRGTFGHVYLGFNSESGEMCAMKEVTLLSDDAKSMESAKQLMQEVHLLSRLRHPNIVQYYGSDTVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKLVDFGMAKHISGKSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTEPPWYQYEGVAAMFKIGNSKELPQIPDHLSNEGKDFVRKCLQRNPHDRPSASELLDHPFVKCAAPLERPIFPEASDPVSEITHGVKALGIGQGRNLSNLDSDRLSVHSSRVLKTNPHESEMHIPRNISCPVSPIGSPLLRSISPQHMNGRLSPSPISSPRTASGASTPLTGGSGAIPFSNHFKQSVYFQEGLGNMPWSSNGVYINGPAHHDSNGIDIFRGMQMGSHITSELASSENDVLGKQFARHPHAESYDFQSVLADRVGRQLLGDHVKINPTLDLSPKSSLLSRANGL 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2465g00024 899 CDD STKc_MEKK1_plant 410 667 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 745 779 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 57 73 - -
Gabi2465g00024 899 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Gabi2465g00024 899 SUPERFAMILY Protein kinase-like (PK-like) 409 668 IPR011009 -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 348 362 - -
Gabi2465g00024 899 Gene3D Transferase(Phosphotransferase) domain 1 408 690 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2465g00024 899 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 680 - -
Gabi2465g00024 899 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 370 410 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 33 234 - -
Gabi2465g00024 899 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 283 313 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 33 54 - -
Gabi2465g00024 899 FunFam Mitogen-activated protein kinase kinase kinase 409 691 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 165 223 - -
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 283 414 - -
Gabi2465g00024 899 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2465g00024 899 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2465g00024 Gabi-Chr2465 235347 243355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2465g00024 1 888 MAP Kinase Kinase Kinase AT1G63700 59.106 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi2465g00024 Pkinase 9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2465g00024 K20717 - gmx:100797994 1507.27