Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2465g00014 ATGCCAGTTGCAAAACTCACGGCCTCTGGCACCCCCGATTTCATGAAAACAGAAGACAGAAATGATTCTTTAGATACCATAATCAAACAAGCTATTGGAAAAGAACCTTTCCTTTCCTTCCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCTTTGGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTTTCTTCTGTGAAGGTTCAGTTACAGAAGTGCGACAAGTGTTCTCGAGAGTTTTGTTCTCCCATTAATTATAGAAGACATATACGTGTACAACATCGGTTGAAAAAGCTTGATAAGGATTCTAAAAAAAATAGGGATCTTTTAGGGGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAATTGTGTCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAGTGCTCTGACAACTGTTATAAAACAAGGATTTTCTTCTCTTCCACAGTATTATCTTAGGGCTGGTTCTGCCCTTCTGGATATTGTTCAATCTAGGCCTTCTAGTTTTCCTTTATCTTCCCAAGAGTTGTTCAGTATCCTTGATGATTCCAGTGAAAAAACTTTTTTGTGTGGCACAGCAATGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAGCCAAAAAACTTAGTTGCTTGCGCAAGTTTCTTGCTGGAGCAGAAATTGGTAAAGGCATGGATCGCTGACAAGGATGCTGAAGCATTGAGATGCCAGAAGCTACTGGTGGAGGAGGAGGAAGCTGCTCAGAAAAGACAAGCCGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAGAAAGAACAGAAGGCAAGGGAACGAATCGAAGATGACACCGACTTTAAAGCGAACATCAGCAACACAACAGAGGATGTGTCACCTGCAGAAACATCTTTGGATACATGTGATTTTGAAGCACATAATCGAGATACATTTGCAGATCATGCTCCTTTACCACATGTTATTTATCACTGCCCAGACACGTATGAAGGTGTAGGCGGGGATACAGAGTCAGGGTATGATTGTGACACTGATCAGAATGTAGAGCAACAGACATCACAAGGACATAATCGTAGGCGCGTGATGACTGCCAGATGGCAAGGGCTGCCAAAATCACAATGGGCTATAGCCAATGGTTTGCATGCAAGCCAGAATTCTCAAATGTCAAAGCTTGGAGTCATTCAAAAATATGGAACCAACCATGATCAAAGGGCAGCTTCTATTGTTAACGGTAGTAAAGTATGGAGTCGAAAGCCCAAACGAGAAACTGATGGGGTGGTTTTAAGAGCCAGACTGCAGGAAGAACCAGACAAACGTAAGAATCGTGAAGTTTTAATAGGATCTGTATCTGTTACTCTGGGCAATTGCAGCCAATCTGAGGGTAATCTAGTGGAATCTCAAGGGGACTGCATGGTAGAGAATCTGGCCAAGCAGAATACTGCTCAGGAGAAGCCAATGAAACATGATTCCTTCCAGGGAGGCAACAGTCGGTTAACTGTTAAGTTTTGGAGGCCGATTATTAGCCAGCATGGAACTAAAGATCCATTGCCACTTCAAAGTGGTGGGACAGAAGCTGATGCAGTTTATGGAAAAGATGAACAAAATTTGTCAGGTCAAAGTAGTTTAAGGATGTGTAATATAGATGGTAGTGGTTTTGGTTCAGGGAACAATATTTCCGATATTGGGGCTAAGGTAGATTCAGAAAGCTTACGGTTATCCAGCCATGCTGCAAAAGCCTTCCTTGCACAAAGATGGAAAGAAGCTATTTCATCAAACCATGTAAAATTGGTTGTTTCACCTGATTCTGAACTTCCTGGATGCCAGCGGGTACAGGAATGTGAACTAGCAACATGCCAGTCGTCTAATGCCGACAGACGTAGCATTCTTGCTAACTCCGGAGTTGCTAAATCCAAACCCAAATTGAAGCCTGAGAAGGGAATTAAGATAAAGTACATTCCCAAACAAAAAGCTGCAGCTTAA 2037 0.4261 MPVAKLTASGTPDFMKTEDRNDSLDTIIKQAIGKEPFLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSSVKVQLQKCDKCSREFCSPINYRRHIRVQHRLKKLDKDSKKNRDLLGAYWDKLSVEEAKEIVSFKNVMLEEVPGSSILSALTTVIKQGFSSLPQYYLRAGSALLDIVQSRPSSFPLSSQELFSILDDSSEKTFLCGTAMSMQRYVFDGEAGKIGLEPKNLVACASFLLEQKLVKAWIADKDAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKARERIEDDTDFKANISNTTEDVSPAETSLDTCDFEAHNRDTFADHAPLPHVIYHCPDTYEGVGGDTESGYDCDTDQNVEQQTSQGHNRRRVMTARWQGLPKSQWAIANGLHASQNSQMSKLGVIQKYGTNHDQRAASIVNGSKVWSRKPKRETDGVVLRARLQEEPDKRKNREVLIGSVSVTLGNCSQSEGNLVESQGDCMVENLAKQNTAQEKPMKHDSFQGGNSRLTVKFWRPIISQHGTKDPLPLQSGGTEADAVYGKDEQNLSGQSSLRMCNIDGSGFGSGNNISDIGAKVDSESLRLSSHAAKAFLAQRWKEAISSNHVKLVVSPDSELPGCQRVQECELATCQSSNADRRSILANSGVAKSKPKLKPEKGIKIKYIPKQKAAA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2465g00014 678 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 676 - -
Gabi2465g00014 678 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
Gabi2465g00014 678 Coils Coil 265 297 - -
Gabi2465g00014 678 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2465g00014 Gabi-Chr2465 212268 221292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2465g00014 18 675 C2H2 Transcription Factor Family AT4G25610 44.411 6.50e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gabi2465g00014 None None None