Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2465g00005 ATGAGCCCTAGATTCAACAACTACCCATCATTTGTCACTGAGCCCAAGCCCGAGTCCGGGCCTGCTTCTTCCACCTCCGGTGATGATTCAAAAACTGAAGCATCATCACCCAAGAAAAGGAGGGGGATAAAGAAGAGGGTGGCGACTATACCGATCAATGGCGTGGATGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCAGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGGTCCCCTTATCCTAGGGCATACTATCGATGCAGCAGTTCAAAGGGGTGTCCCGCGAGGAAGCAAATTGAGAGAAGCCGTGTGGACCCCACTATGCTCATCGTCACCTACGCCTGCGATCACAACCACTCCCTCCCCGCCGCTAGGTCCCGCTCCACCACCGTAGATCCCGCCACTCCCTCCTCCTCAAGCGACGGTACTGTTACCACTGCCGCCGACTCCATCTCCGGGATCCTACAGGAGGAGCCCGAGGCTTCCGCGAGCCATCCCGATCTCGAACTCGCCGGCGACTCTGCGGTTTTGCTCGCCTACCACCACCACCGCAGCGAATTTGAATGGTTCGATGACTTGGCCTCCGCCGGGGTTCTGGAAAGTCCGATTTGCGGGGAGGCTGAGGAGGTGGCGGTGGCGGTGGCGATGAGGGAAGAAGACGAGTCTCTGTTCGCTGACCTCGGCGAGTTGCCGGAGTGTTCATCGGTTTTCCGGCGAGGGAACACGGTGAGGTCCAGCGCGATTCAGTGCGGTGGCACCGCAGGATAA 786 0.5827 MSPRFNNYPSFVTEPKPESGPASSTSGDDSKTEASSPKKRRGIKKRVATIPINGVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQIERSRVDPTMLIVTYACDHNHSLPAARSRSTTVDPATPSSSSDGTVTTAADSISGILQEEPEASASHPDLELAGDSAVLLAYHHHRSEFEWFDDLASAGVLESPICGEAEEVAVAVAMREEDESLFADLGELPECSSVFRRGNTVRSSAIQCGGTAG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2465g00005 261 MobiDBLite consensus disorder prediction 1 31 - -
Gabi2465g00005 261 ProSiteProfiles WRKY domain profile. 68 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2465g00005 261 Pfam WRKY DNA -binding domain 69 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2465g00005 261 MobiDBLite consensus disorder prediction 130 151 - -
Gabi2465g00005 261 SUPERFAMILY WRKY DNA-binding domain 63 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2465g00005 261 SMART WRKY_cls 67 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2465g00005 261 MobiDBLite consensus disorder prediction 1 77 - -
Gabi2465g00005 261 FunFam WRKY transcription factor 65 54 128 - -
Gabi2465g00005 261 Gene3D WRKY domain 55 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2465g00005 261 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 241 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2465g00005 Gabi-Chr2465 61600 63838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2465g00005 21 248 WRKY Transcription Factor Family AT3G58710 49.787 2.26e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2465g00005 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2465g00005 - - gmx:100127424 331.257