Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2465g00001 ATGATGTCAAGGTCGTATACCAATCTTTTAGATTTGGCATCCGGAAATTTCCCGGCAATGGGAAGGGAGCCAAGGGAACGGAGGCGGATGCCGAGGGTTATGAGTGTCCCCGGGATTGTCACAGAGCTGGATGATGATCAGGCAGTTAGTGTTTCTTCTGATAATCCATCAACGATTTCTACTGATCGAATGATCATTGTAGCAAACCAGCTACCTTTGAAAGCAAAGCGAAAAGAGGACAACAACGGGTGGAGTTTTAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAGGATGGTCTTCCGGAAGAGATGGAGGTTCTTTATGTTGGGTCTTTGCGTGTTGACATTGATCCAGCTGAACAGGATGATGTGTCACAGTACTTACTGGAGAAATTCAAATGCGTCCCTACTTTTCTACCTCCGGATGTTTTGACAAAATTTTATGATGGCTTCTGTAAAAGGCAGTTATGGCCTCTTTTTCATTACATGTTACCATTTTCAACAGATAAAAGTCACCGTTTCGACCGGGCTTTGTGGGAAGCCTATGTGCTGGCAAATAAGCTGTTTTTTCAGAAGGTAGTTGAAATAATAAACCCAGAAGATGATTATATTTGGGTTCATGATTATCATTTGATGGTGCTGCCAACCTTTATAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTGCATAGCCCATTTCCGTCATCAGAGATATATAGGACTCTTCCGGTCAGGGAAGAGATACTGAAAGCTCTACTAAACTCTGATATCATTGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCCTGTTGTAGTCGTATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGCTATTTAGGATTGGAATATTATGGAAGGACTATCAGTATCAAGATTATGCCTGTCGGGATTCACATGGGACGGATTGAATCAGTTATGAGAATGGCAGATGAGGAATGTAAGATAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATCCTGCTTGGTGTTGATGATATGGACATTTTTAAAGGCATAAATCTGAAGATTTTGGCTATGGAGCAGATGCTCAAACAACACCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTGCAAGGGGTAATGGGATACATCTAGAGGAGATACATACTGAAATAGAAGAAAGCTGCAGCAGGATCAACAGAGTGTTTGGGCGACCTGGTTATGAACCTATTGTTTTCATCGATAGGTCGGTTTCAATTGCTGAAAAAGTTGCCTTTTACAGACTTGCAGAGTGTGTTATTGTCACGGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATCGCTTGTAGACAGGGAATATCTAGTACTGAATCATGTTCCAATGTCAGTGAGCCAAAGAAGAGTATGCTAGTAATATCAGAATTTATTGGGTGCTCTCCATCACTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTGCAGAGGCAATGAACGAGGCCATCTCAATGGGTGATGGAGAGAAACAGTTGCGACATGAAAAGCATTACCGGTATGTCAGCACTCATGATGTGGCTTACTGGTCACGTAGTTTCTTGCAAGACATGGAAAGGGCTTGCACAGACCTTCTAAAGAAAAGATGTTGGGGAATAGGTCTCAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAGAAAGCTCTCCATTGATGCTATGGTTTCAGCATACAAAAGGGCAAGGAGTAGAGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCGAGCAAGGAGGTCCTCTCTATTTTAGAAATACTCAGTGCAGATCCCAAAAATGTAGTTTTCATTGTTAGTGGAAGGGGGAGGGAGAGCTTAAGTCAGTGGTTTCTTCCTTGTAAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGATGGTCTCAGAGTGGAGAATGGGAAGTTTGCGGTAAGTGCTCCGAATTTGGATGGATGCAGATTGCTGAACCTGTAATGAACCTATATACAGAGGCAACTGATGGTTCCAGCATCGAACGAAAGGAAAGTGCTTTGGTCTGGCAATACCGTGACGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGCGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGCCAGTTTATAGTTGAAGTAAAGCCGCAGGATGTGAGCAAAGGCTTAGTTGCTGAAAAGATATTTTCGTCAATGGCTGAGACTGACAAACAAGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTCGTGGTGCAATCTCAAGAAATATTCTTTCCACCAATGCTTCTGTATTTGCTTGCACAGTTGGACAAAAACCAAGCAAAGCTAAGTATTATCTGGATGATACGTCTGAAGTAATAAACATGCTAGAATCTTTGGCCGAAGAATCAGATTCTTCACCCAACATAGAAGAAACTGGGGATTCCTCTTGA 2574 0.4235 MMSRSYTNLLDLASGNFPAMGREPRERRRMPRVMSVPGIVTELDDDQAVSVSSDNPSTISTDRMIIVANQLPLKAKRKEDNNGWSFSWNEDSLLLQLKDGLPEEMEVLYVGSLRVDIDPAEQDDVSQYLLEKFKCVPTFLPPDVLTKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRALWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEECKIRELKQQFEGKTILLGVDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGNGIHLEEIHTEIEESCSRINRVFGRPGYEPIVFIDRSVSIAEKVAFYRLAECVIVTAVRDGMNLTPYEYIACRQGISSTESCSNVSEPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMGDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLKKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRARSRAILLDYDGTVMPQNSINKSPSKEVLSILEILSADPKNVVFIVSGRGRESLSQWFLPCKKLGIAAEHGYFLRWSQSGEWEVCGKCSEFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMAETDKQADFVLCVGDDRSDEDMFEIVRGAISRNILSTNASVFACTVGQKPSKAKYYLDDTSEVINMLESLAEESDSSPNIEETGDSS 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2465g00001 857 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Gabi2465g00001 857 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Gabi2465g00001 857 Gene3D - 721 853 IPR023214 -
Gabi2465g00001 857 Gene3D - 592 691 IPR023214 -
Gabi2465g00001 857 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Gabi2465g00001 857 SUPERFAMILY HAD-like 593 841 IPR036412 -
Gabi2465g00001 857 Gene3D Glycogen Phosphorylase B; 56 316 - -
Gabi2465g00001 857 NCBIfam HAD-IIB family hydrolase 595 800 IPR006379 -
Gabi2465g00001 857 Gene3D Glycogen Phosphorylase B; 317 530 - -
Gabi2465g00001 857 NCBIfam trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Gabi2465g00001 857 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Gabi2465g00001 857 CDD HAD_TPP 594 835 - -
Gabi2465g00001 857 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 842 IPR001830 GO:0003824|GO:0005992
Gabi2465g00001 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Gabi2465g00001 857 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Gabi2465g00001 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Gabi2465g00001 857 Pfam Trehalose-phosphatase 596 831 IPR003337 GO:0003824|GO:0005992
Gabi2465g00001 857 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2465g00001 Gabi-Chr2465 15231 22296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2465g00001 1 847 Trehalose Biosynthesis Gene Families AT1G06410 77.922 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2465g00001 K16055 - gmx:100800847 1587.01