Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2463g00010 ATGGGGAAAAAAGGAGGCAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCATCTTCTAAGGACTCGCCGGTGCCGGTGAAGAAGGACAACAAGACAGAGAAATTGCAGATTGAAGCGCCAGAGGTGGTATCTTTTGAGCATTTTCCTGCAGTGAGTTCTCCTGAAATCACAAATGAGGATAGTAACACATCAACGCCAGTGACTGAAGATAGAAATCATGCCATTGCCGTTGCAGAAGCAACTGCTGCAGCTGCTGAAGCTGCAGTGGTAGCTGCTCAAGCAGCTGCTAGAGTTGTTAGATTGGCAGGTTATGGACGCCACCCAAGGGAAGAAAGAGCAGCAACACTCATTCAATCATATTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCATTGAAGGGATTAGTGAGGCTGCAAGCACTAGTGAGGGGACATAATGTGCGCAAGCAAGCGCAGATGACAATGCGCTGCATGCAAGCATTAGTTCGAGTGCAGGCAAGAGTAAGAGCTCGCAGACTCCAATTGACTCACGAAAAACTTCACAGGACAGTGGAGGAGCATGATCCAAGAGAACTTGAGAAGCAAGAGCCTAAGCCTATGAGCCCCATGAAAAGGTTAGACATCAATGGTTGGGACAATAGGCGTCAAAGTACCCACAAAGTTAAAGAAAACGATTTGAGGAAGCATGAAGCTGCAATGAAGAGAGAGAGAGCTCTTGCATACGCTTTCAACTACCAGCAGCAACAGAATGGTGATGATATGGGAATCAATTATCCTGATGAGCGTGAAAAGGCCCAATGGGGTTGGAACTGGTTGGAGCATTGGATGTCATCACAACCACACCATGTTAAACAGTTGGGGCCACGTGAAACCTCTTATATGACTCTTGCTTCTACAACCTCAACCCCCACCGATAACATGTCTGAGAAGACCGTAGAAATGGACATGGTTGCAACTCCCGGCCCAAGCAACCTCAACATGGGCCTCATGAACCAAGACTTTCTTGAATCAAGCCCAACTTCCAGTAGACACCATCAGAGACCGTCCAGCCCAAGTAGACCTAGCTATATGGCCCCAACCCAGTCTGCGAAGGCCAAACTTCAGGGTCAAGGCCCAGTTAAGCCAAGGGTTTCATCCGTGCCTCAGTGGAACTCATCAACAAAGGGAGGCTCGGTTATTGGGTCGGGCTGTGACTCGTCCAGTTCAGGTGGAGGGAGTGCAGCTTACCAATTTCCAAGGAGCCCGAGCCCAAAATTTAATGGGGTTGGTTCACAATCTAGACGGATTGTGGGTAGCAGCCCAGATTACGCAGAGGATTGGGCCCTTCCACTCGGAGCCCATGGCTGGGCATAA 1359 0.4937 MGKKGGSWFSSVKKVFKSSSKDSPVPVKKDNKTEKLQIEAPEVVSFEHFPAVSSPEITNEDSNTSTPVTEDRNHAIAVAEATAAAAEAAVVAAQAAARVVRLAGYGRHPREERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHEKLHRTVEEHDPRELEKQEPKPMSPMKRLDINGWDNRRQSTHKVKENDLRKHEAAMKRERALAYAFNYQQQQNGDDMGINYPDEREKAQWGWNWLEHWMSSQPHHVKQLGPRETSYMTLASTTSTPTDNMSEKTVEMDMVATPGPSNLNMGLMNQDFLESSPTSSRHHQRPSSPSRPSYMAPTQSAKAKLQGQGPVKPRVSSVPQWNSSTKGGSVIGSGCDSSSSGGGSAAYQFPRSPSPKFNGVGSQSRRIVGSSPDYAEDWALPLGAHGWA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2463g00010 452 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Gabi2463g00010 452 MobiDBLite consensus disorder prediction 15 34 - -
Gabi2463g00010 452 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Gabi2463g00010 452 Gene3D - 109 160 - -
Gabi2463g00010 452 MobiDBLite consensus disorder prediction 186 203 - -
Gabi2463g00010 452 PANTHER IQ-DOMAIN 5-RELATED 1 401 - -
Gabi2463g00010 452 SMART iq_5 110 132 IPR000048 GO:0005515
Gabi2463g00010 452 SMART iq_5 133 154 IPR000048 GO:0005515
Gabi2463g00010 452 MobiDBLite consensus disorder prediction 186 210 - -
Gabi2463g00010 452 MobiDBLite consensus disorder prediction 329 432 - -
Gabi2463g00010 452 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Gabi2463g00010 452 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Gabi2463g00010 452 MobiDBLite consensus disorder prediction 329 369 - -
Gabi2463g00010 452 MobiDBLite consensus disorder prediction 377 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2463g00010 Gabi-Chr2463 216205 220734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2463g00010 1 420 IQD Protein Family AT3G49260 53.261 8.06e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2463g00010 - - gmx:100798026 542.732