Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2463g00009 ATGGGGAAAAAAGGAGGCAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCATCTTCTAAGGACTCGCCGGTGCCGGTGAAGAAGAAGGACAACAAGACAGAGAAATTGCAGATTGAAGCGCCAGAGGTGGTATCTTTTGAGCATTTTCCTGCAGTGAGTTCTCCTGAAATCACAAATGAGGATAGTAACACATCAACGCCAGTGACTGAAGATAGAAATCATGCCATTGCCGTTGCAGAAGCAACTGCTGCAGCTGCTGAAGCTGCAGTGGTAGCTGCTCAAGCAGCTGCTAGAGTTGTTAGATTGGCAGGTTATGGACGCCACCCAAGGGAAGAAAGAGCAGCAACACTCATTCAATCATATTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCATTGAAGGGATTAGTGAGGCTGCAAGCACTAGTGAGGGGACATAATGTGCGCAAGCAAGCGCAGATGACAATGCGCTGCATGCAAGCATTAGTTCGAGTGCAGGCAAGAGTAAGAGCTCGCAGACTCCAATTGACTCACGAAAAACTTCACAGGACAGTGGAGGAGCATGATCCAAGAGAACTTGAGAAGCAAGAGCCTAAGCCTATGAGCCCCATGAAAAGGTTAGACATCAATGGTTGGGACAATAGGCGTCAAAGTACCCACAAAGTTAAAGAAAACGATTTGAGGAAGCATGAAGCTGCAATGAAGAGAGAGAGAGCTCTTGCATACGCTTTCAACTACCAGCAGCAACAGAATGGTGATGATATGGGAATCAATTATCCTGATGAGCGTGAAAAGGCCCAATGGGGTTGGAACTGGTTGGAGCATTGGATGTCATCACAACCACACCATGTTAAACAGTTGGGGCCACGTGAAACCTCTTATATGACTCTTGCTTCTACAACCTCAACCCCCACCGATAACATGTCTGAGAAGACCGTAGAAATGGACATGGTTGCAACTCCCGGCCCAAGCAACCTCAACATGGGCCTCATGAACCAAGACTTTCTTGAATCAAGCCCAACTTCCAGTAGACACCATCAGAGACCGTCCAGCCCAAGTAGACCTAGCTATATGGCCCCAACCCAGTCTGCGAAGGCCAAACTTCAGGGTCAAGGCCCAGTTAAGCCAAGGGTTTCATCCGTGCCTCAGTGGAACTCATCAACAAAGGGAGGCTCGGTTATTGGGTCGGGCTGTGACTCGTCCAGTTCAGGTGGAGGGAGTGCAGCTTACCAATTTCCAAGGAGCCCGAGCCCAAAATTTAATGGGGTTGGTTCACAATCTAGACGGATTGTGGGTAGCAGCCCAGATTACGCAGAGGATTGGGCCCTTCCACTCGGAGCCCATGGCTGGGCATAA 1362 0.4934 MGKKGGSWFSSVKKVFKSSSKDSPVPVKKKDNKTEKLQIEAPEVVSFEHFPAVSSPEITNEDSNTSTPVTEDRNHAIAVAEATAAAAEAAVVAAQAAARVVRLAGYGRHPREERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHEKLHRTVEEHDPRELEKQEPKPMSPMKRLDINGWDNRRQSTHKVKENDLRKHEAAMKRERALAYAFNYQQQQNGDDMGINYPDEREKAQWGWNWLEHWMSSQPHHVKQLGPRETSYMTLASTTSTPTDNMSEKTVEMDMVATPGPSNLNMGLMNQDFLESSPTSSRHHQRPSSPSRPSYMAPTQSAKAKLQGQGPVKPRVSSVPQWNSSTKGGSVIGSGCDSSSSGGGSAAYQFPRSPSPKFNGVGSQSRRIVGSSPDYAEDWALPLGAHGWA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2463g00009 453 MobiDBLite consensus disorder prediction 15 35 - -
Gabi2463g00009 453 MobiDBLite consensus disorder prediction 187 204 - -
Gabi2463g00009 453 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gabi2463g00009 453 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Gabi2463g00009 453 SMART iq_5 111 133 IPR000048 GO:0005515
Gabi2463g00009 453 SMART iq_5 134 155 IPR000048 GO:0005515
Gabi2463g00009 453 MobiDBLite consensus disorder prediction 187 211 - -
Gabi2463g00009 453 MobiDBLite consensus disorder prediction 330 433 - -
Gabi2463g00009 453 MobiDBLite consensus disorder prediction 330 370 - -
Gabi2463g00009 453 MobiDBLite consensus disorder prediction 378 412 - -
Gabi2463g00009 453 Gene3D - 110 160 - -
Gabi2463g00009 453 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Gabi2463g00009 453 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Gabi2463g00009 453 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2463g00009 Gabi-Chr2463 216197 220734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2463g00009 1 421 IQD Protein Family AT3G49260 53.509 2.28e-107 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2463g00009 - - gmx:100798026 540.806