Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2461g00009 ATGGTGACCATTACAGCTTCTCACACTGTCATTCCAAATCAGTCAACTCCCAAGACTCGTTTATGGCTTTCTGATAATGACCATGTCGTGCGTCTAGGTCATACACCCATTATCTACGTTTACAAAGCAAAACACAACCACGAAGCCATTGAGAGGATGAGAACCTCGCTCACCGAGATTTTAGTGCATTACTATCCAGTAGGTGGTAGATTGAGTTGGATTGAAGAACGTGGTAGATTGGAATTGGATTGTAATGCAAAGGGAGTGATATTGCTTGAAGCTGAAACCACAAAAACATTGGATGAATATGGAGATTTTTCACCCACTTACCCCATCAAGGACCTTATTCCAACCATTGATTATACTCAACCTATTGAGGAGCTGCCCTTGCTGCTGGTCCAACTCACAACATTCCATAGAGACCAAAGCCTTGCCATGGGTGTTGCTATCTCTCATATTTTGTTTGATGGGGTTGCTACTATTCAATTCATAAACTCATGGGCAAAGCTGGCTCGTGGGGATACATTAGACCCTGATGAAATGCCATTTCTAGATCGAACAATACTCAAATTCCCACACTCACCATTAGCACCACGCTTTGATCACCCTGAGTTGAAGCCTCCCCCACTCATACTAGGAACCTCTGATTGCACTAATGAGCAAAAGAAGAAAACAACAGCTGCATCATTGAAACTGACATCAGAGGAAGTGGAGAAGCTGAAGAAGAAGGCCAATGATCAATCCCAGAAAGATGGGTCAAGACCATATAGCAGATATGAAGCTATTGCTGCACATATATGGAGATGTGCATCTAAGGCTCGTGAACTTGATGACAATCAACCAACTCTGGTTCGGTTCAATGCTGATATTCGCAGTAGACTGAATCCACCTCTGCCTAGTAATTATTCTGGGAATGCTTTGGCAAGAACAGTGACATCAACATGCTATGTTGGAGAACTTATATCAAATCCTTTGAGCTATGCAGCACAGATGATACGGGAATCAGTTGAGTTGCTTACAAATGAGTACATAAGGTCACAACTAGATGTTATTTTGGGCCAGGAGGTACTAGATTGCTTAAGGGCTTTCGTCTTGAGACAAGGAGAACTTATGATAGCCCCATTTTCTGGGAATCCTAATCTTCATCTCACAAGCTGGATGAGCATGCCTATGTATGAAGCTGATTTTGGGAGGGGAAAGCCTGTGCATTTTGGTCTAGGATATGTGTCTCCACATGACAGGGCATTGATTATTCCAAGCCCAGATGGGGATGGCTCTGTTATTGTGTCTATGCACTTCCAGATGGCACATATGCAACTTTTCAAGAAGTTCTTCTACGACGATATATGTGTTGGCGTGCGTTCCTCCCTTTAA 1374 0.4301 MVTITASHTVIPNQSTPKTRLWLSDNDHVVRLGHTPIIYVYKAKHNHEAIERMRTSLTEILVHYYPVGGRLSWIEERGRLELDCNAKGVILLEAETTKTLDEYGDFSPTYPIKDLIPTIDYTQPIEELPLLLVQLTTFHRDQSLAMGVAISHILFDGVATIQFINSWAKLARGDTLDPDEMPFLDRTILKFPHSPLAPRFDHPELKPPPLILGTSDCTNEQKKKTTAASLKLTSEEVEKLKKKANDQSQKDGSRPYSRYEAIAAHIWRCASKARELDDNQPTLVRFNADIRSRLNPPLPSNYSGNALARTVTSTCYVGELISNPLSYAAQMIRESVELLTNEYIRSQLDVILGQEVLDCLRAFVLRQGELMIAPFSGNPNLHLTSWMSMPMYEADFGRGKPVHFGLGYVSPHDRALIIPSPDGDGSVIVSMHFQMAHMQLFKKFFYDDICVGVRSSL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2461g00009 457 Pfam Transferase family 1 446 - -
Gabi2461g00009 457 Coils Coil 227 250 - -
Gabi2461g00009 457 Gene3D - 1 207 IPR023213 -
Gabi2461g00009 457 Gene3D - 214 448 IPR023213 -
Gabi2461g00009 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2461g00009 Gabi-Chr2461 186010 187793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2461g00009 2 447 Monolignol Biosynthesis Gene Families AT5G48930 37.194 6.02e-94 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2461g00009 K13065 - gmx:100779814 648.662