Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2461g00006 ATGGTAACAAATATTGGTTCTTACACTGTTATCCCAAATCAGCCAACTCCAAAGGGTCGTTTATGGCTGTCTGATAGTGATCTTGCCGAGCATAGTCCAGCATATACTCCCTCTATCTACGTTTACAAACCAAAACACAATCACCACGATGTCATCGAGAGGATGAGAACCTCTCTCAGTGATATTTTAGTGTATTACTATCCAGTTGCTGGCAGATTGTGCTGGATTGATGAATGTGGTAGAATGGAAGTGGATTGTAATGCAAAGGGAGTTACATTGCTTGAAGCTGAAACCACTAAAACATTGAATGAATATGGAGATTTTTCACCTACTCAGCCCATCAAGGACCTTATTCCAACCATTGATTATACTCAACCTATTGAGGAGCTTCCCCTGTTTCTAGTGCAACTCACAAGATTCCATGGTGACCAAAGCCTTGCCATTGGTGTTGCTATCTCTCATCTTTTGTGTGATGGGATTGGTGCTATTCAATTCATAAACTCATGGGCAAAGCTGGCTCGAGGAGATACATTAGCACCACATGAAATGCCAATTCTAGATCGAACAATACTCAAATTCCCACTCTCACCATTAGCACCACGCTTTGATCACCCTGAGTTGAAGCCTCCCCCATTCATACTAGGAACCTTTGATTGCATTACTGAGCAAAAGACAACAGCTGCATCATTGAAACTGACATCAGAGGAAGTTGAGAAGCTGAAGAAGAAGGCCAATGATCAATCCCAGAAAGATGGGTCAAGACCATATACCAGATATGAAGCTATTGCTGCACATATATGGAGATGTGCATCTAAGGCTCGTGAACTTGATGACAATCAACCAACTTTGGCTCGAATCATTGCTGATATTCGCAGTAGACTAAATCCACCTCTGCCTCATAATTACTTCGGGAATGCTCTGGCTCGAACAGTGACACCAACATGTTATATAGGAGAAATCATATCAAACCCATTGAGTTATGCTGCTAAGAAGATAAGGGAAGCACTTGACTTGCTTACAAATGAATACGTAAGGTCACAGCAAGATGTTATTTTCGGTCAGGAGCAACTCGATTCCTTAAGGGGTTTCTTCTTCCGACAAGGAGTACGTCGGACTGCCCCATATTATGGGAATCCTAACATTTTCATCGTAAGTTGGATGAGCATGTCCGTGTACGAAGCAGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGTGAAGGATTTGTGTCTCCATATGATACGGCAAGGATTGTTCAAAGCCCAGAGGGGGATGGATCTGTTATTGTGTCTATGCACTTCCAGATAGAACATATACAACTTTTCAAGAAATTCTTCTACGAGGATATATGA 1350 0.42 MVTNIGSYTVIPNQPTPKGRLWLSDSDLAEHSPAYTPSIYVYKPKHNHHDVIERMRTSLSDILVYYYPVAGRLCWIDECGRMEVDCNAKGVTLLEAETTKTLNEYGDFSPTQPIKDLIPTIDYTQPIEELPLFLVQLTRFHGDQSLAIGVAISHLLCDGIGAIQFINSWAKLARGDTLAPHEMPILDRTILKFPLSPLAPRFDHPELKPPPFILGTFDCITEQKTTAASLKLTSEEVEKLKKKANDQSQKDGSRPYTRYEAIAAHIWRCASKARELDDNQPTLARIIADIRSRLNPPLPHNYFGNALARTVTPTCYIGEIISNPLSYAAKKIREALDLLTNEYVRSQQDVIFGQEQLDSLRGFFFRQGVRRTAPYYGNPNIFIVSWMSMSVYEADFGWGKPVYFGEGFVSPYDTARIVQSPEGDGSVIVSMHFQIEHIQLFKKFFYEDI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2461g00006 449 Gene3D - 1 209 IPR023213 -
Gabi2461g00006 449 Gene3D - 219 448 IPR023213 -
Gabi2461g00006 449 Pfam Transferase family 1 447 - -
Gabi2461g00006 449 Coils Coil 329 349 - -
Gabi2461g00006 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Gabi2461g00006 449 Coils Coil 227 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2461g00006 Gabi-Chr2461 162881 167952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2461g00006 1 447 Monolignol Biosynthesis Gene Families AT5G48930 38.242 8.95e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2461g00006 K13065 - gmx:100779814 607.446