Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2460g00017 ATGGGCGATGGAGGTGTCGTGTGCATGCCTTTGCAGTATATTATGGAGAGGTTACCGAATGCCGAGAAGACGCTTTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGCTCAAGTTTGCTGACAGCGAGAGGAAGAAGATGAAGGCGAGAAAAGAGGAGCCTGCGAGGAAGAGTGAATTAGGGTTGGACAGAGTGAGCAAGAGAAGCAACGATGTTGAGAATGGTGAAATATGCGGGGAGATGGTGCAGAAGGAAGAAGTGGAAGAGGGTGAATTGGGCACTTTGAAGTGGCCTAAAAGTGACCTGGAAAATGGAGAGTTCGTGCCTGAGCTGCTGCCAAGGAGAAGCGAGATTGAGAACGGAGAGATTGTGAGTGAGAAATGGAAAACAAGGGAGCTGGAGAAGGGAGAGATTCATTCTGGCAAATGGAGAAAAGATGATGTGGATAAAGGGGAGGTTTTTCCTGAGAAGGGTAGGAAAGGAGAAGCTGAGAAAGGTGAATATGGGTCGTGGAGAGGTACAAAGGATGACATCGAGAAGGGAGAATTCATTCCAGATAGATGGTATAAGGGAGAAATGGGTAAGGACAATTATGGTAACAGTAGAACCCACAGGTTCCATTCAGATAGGGACAAAGGGTGGAAAAGTGAACGTGAACGTACCCCCACTTCTGGGAGATATACAGTTGATGAAGGATTTAGAAAGAAAGAATTGAATAAAACTGGGAGTCAGCATGCTAAAAGTTCTCCCAGGTGGGATAGTGGACAACAGAGGAATATAAGGATCAGTTCAAAGGTTGTGGATGACGAGAAAAACATACACAACAACGGTAAGGACCCTACACGAGATTATACTTCTGGAAGTCGCTTGAAGAGGTTCGGTAATGATTCTGACGGCTGTGAGTGGAAGCGGGCAGCAGATTATGCCGGTTTAAAAAGCCGAAGGGTTTCTGATGATAGCTATCGCCATGTTTGTTCAGAGAACTATTCTCGTCGCTCTGGGGAGCAGTCTTACCGAAATAATAATTCTGCAAAATTATCAGCAGACAAGTATTCTTCTAGGAATCATGAATCTTCTTTCTCTACCAGACCAGCTTATGACAGGCATGGACGTAGCCCTGGTCATTCTGAGCGGTCGCCTAGAGATCGAGGCAGATATTATGATCATAGAGATCGCACTCCACTGCATCGATCCCCCTGTGGTCGTGACAGGTCTCCATATTACAGGGAGAAATCCCCCCATGGTCGGGAGAGGTCCCCATATACAAGGAACAGGGATAGAGGTCGTCAGCATGATCATAAATTGAGAAGTCCTACATGCGCCGAGCAGTCGCCACAAGATCGAGTTCGGCATCATGATCGGAGGGACCATACTCCAAATTTAGTAGAAGGATCCCCCCTTGATCGAGCTAAGAAAGATGGTCATCAGGAAACAAGTTGTAAAACCTTATCAAGTGAAAAGCACAACTCCGAGTATAGTTGTAAGGATCATGAAGATAAGAACATTCAAAGGGAGTCAAATGGTTCAGTTACAGAATCTCAAGGTGAAAAAAGTTTGCAAGTTACGAATGAGTCTATAGAGAATGACACCTGCTGTCAACCTGTAAAGGAACAGCAGTTCTGCAGCCCAACTTTAATTAATAAAGAATCTCCTTGCTTTGAGCCACCTCCTGAGGAGCTGCCTTCGATGGAAGAAGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTTTTACCTCGATTATGGTGGTGTAGAAAATGGGCCTGCTAAACTGTGTGACATCAAGGTCCTTGTTGATAAAGGGGTACTGATGTCAGATCACTTTATCAAGCATTTAGATAGTGACAGGTGGTTAACAGTTGAAAATGCAGCATCACCAACGGCAGCTCAGAGTTTTCAGTCTGTTATGTCGGATACCATAACTCAACTGGTAAATCCTCCAGAAGCTCCTGGTAATCTTTTGGCAGATACTGCAGATATTCTTCAATCTGGTCCTGAGAATTATCAGGAAATGCCAGCCCCGCAGCAGCCACTGGTATGCCCGAACGACAGTTTGCTTACATCTGAATTTTTCGAGGACTTCCACATTGATGAAAGGGTCAGAAATCTGTTAGAGGGTTATGATGTCATTCCTGGGATGGAACTTGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATGCAAAAGGGGAGGGCTTGGGAGACTATGAAGGTTTTCCTTGGCATATTTTCTGCTTTAGGGAAGATTGTGATTCAAGTACTGATTTAACATCTAGACATTCAGAGTCTCAGTTAAGTACCGGTGACAAGGATAATGGATATTCCTTTGGTGTTCCTAGTGATTGGTTTTCCACCTGTTGGTCATGCAAAGGTGGCGACTGGAAGAGGAATGATGATGCCCAGGATAGATATTCTCGGAAGAAACTTGTACTAAATAATGGTTTTCCATTATGTCAAATGCCAAAGTCTGGCTGTGAAGATCCTCGCTGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAGGAGGCTTGATCTCCCTCCATGGGCTTTTGGTGCTGATGAATGGGTTGATTGCAGTGCTGCGAGCAGATCAATTCAAAGTAAGCCTGCTTCTGTGAGAGGAGTGAAAGGAAATGTTCTTTCGGTGGTCAGGATAAATGCATGTGTGGTCAAAGACCAGGGATCATTAGACCAGGGATCATTGGTCTCTGAGTCACGCCAGAAGACCCGAGGCAAGGATAGACATCATTCAAGGTCAACTCGGCCTTTCTCTTCTACCAGTGATAGCAGGAGATCATCAACTGAAAAAGATTCTCAGTCAAAAGCTGATAGTGATCAAGGTTCTTGCCGGAGCATGGAATTCATTAACATCCCTAAAGACCATCTCTGTACTGTTCATGAGCTGCAGTTACATTTGGGTGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGCCCTTCGTCATTTTTGGAGCTACAGTATTTTGTAGATCAAGGAATTATAAAAAAGCATAGCAGTGTGTTTAGGAAAAGTGATAAACTCTGGGTTCCTGTTACCTCTGCTGCAGAAATTTCTGATGTTAGTCTCGCGAGCCACCAAGAAAGCAGTTCAGCGTCTGGTGCATGCTCTGGACTTCCGTCAAAGCAAACTCAAGGTGTTTCATGCAGTGAACCTCACACAATTTCAAGTTTGTTTAACTGCATACACCCTCAATTTGTTGGTTATACTCGCGGGAAGCTACATGAACTGGTAATGAAATCATATAAGAGCCGGGAGTTCGCTGCGGCTATAAATGAGGTGTTAGATCCCTGGATCAATGCAAGACAACCAAAGAGAGAAATTGAGAAACCAATATATTTGAAATCAGAAGGTGATGCACATGCTGCCAAAAGAGCCCGAATGATGGTTGATGGCAGTGAAGAAGACAGTGATTTGGAAGATGTTGATCTTACTATTGAGAAGGATGGATCAACTTTTGAGGATCTATGTCGTGATGCTTCTTTCCCTGAAGAATTTGGTATTACTGATTCTGATGTAGGAAGCCGGGGCTTATTGGACGGTCGTGTAATGGCACAAATCTTCCATTTTTTGAGATCTGATTTGAAGTCTCTTGTCTTTGCATCAATGACTTGCAAGCATTGGAGAACTGCTGTAAGGTTTTACAGGGAAGTTTCAAGACAGGTCAACTTGACATCCTTAGGTCATTCCTGCACTGATTCCATGTTATGGAACATTATGAATGCTTATGAGAAAGACAAGATCAGTTCCATGATTCTAATGGGTTGTACCAATATTACGGCTGACATGCTTGAGAAAATTCTTCTTTCATTTCCTGGTTTATGTACCGTAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCCTAAATTTGCCAATGTGAAATGGATCAAGAGCCGAAGTTCACACATGACTAGAATTGCAGAGGAGCCTCATAAAATCAGAAGCCTTAAACACATTACAGAGCAAACTACATCTGTTTTCAAATCCAGCAGTTTAGGTATTGATGATTTTGGTCAATTGAAGGATTATTTTGACAGTGTGGATAAGAGAGACACGGCGAAGCAATTATTCCGTCAAAACTTATACAAGCGTTCAAAACTATATGATGCGAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGTACAAGAAGATGGGCAATCAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTGAGGGAAATTATGAAGACAAACTCCTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATAAAAACTGGTTATTACAGTGGCCGTGGGTTGAGCTCTGTCAAGGAGGACATAAGTAGAATGTGCCGCGATGCAATAAAAGCAAAGAATCGAGGTGATGTTAGTGACATGAACCATATTATCACGTTATTTATTCAGCTTGCAACACGATTGGAAGAGAGTTCTAAATCTGTGCATGACAGAGATGCACTACTGAAGTCATGGGACAATTCAAAGTATAAGAAGAATAGATTGGTGAATGAAAGGAAGTATAGGAATAATGGAATACATGGTGGTTTGGATAATGTAGATTATACCTCTGATCGAGAAATTAGGAGGCGCTTGTCAAAGTTGAATAAGAAATCTATGGACTCAGAAAGTGAAACATCTGATGACCTTGATAGGTCTTATGAAGATGGTAGGAGCGACAGTGGTACTTCAACCTCGGACACTGAAAGTGACCAAGAAGTACATTCAGAAAGTATAGTTAGGGAGTCAAGAGGGGATGGATGCTTCACACCTGGGGAAGAGTTGGATTTTATAACTGATGATCGCGAGTGGGGTGCTCGCATGACGAAAGCAAGCCTGGTACCTCCAGTTACCCGGAAATATGAAGTCATTGATCAATATGTCATTGTAGCTGATGAGGAGAATGTGCAAAGGAAGATGAGGGTTTCTTTACCGGATGACTATGCTGAGAAGCTGAGTGTGCAAAAGAATGGAACCGAGGAGTCAGATATGGAACTTCCAGAAGTCAAAAATTACAAACCAAGAAAGCAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATCGATCCTTATACACATAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTTCAGGAGAAGCATTTGTTTATAGAAGACATGATCCTTCGAACATTGAATACGCAAGTTAGGAATTTTACTGGAACTGGAAGCACTCCAATGAGCTATGCTTTGCAGCCTGTTATTGAAGATATTAAAAGGTGCGCGGAGGAGGACTATGATGCAAGAACGGTTAGAATGTGTCAAGGTATCCTAAAGGCCATAGAAAGTCGTCCCGATGATAAATACGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCGACAAGGAAGAAGGCTTTGCCCAAGATGATTTTGTCGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTCGAAAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCGGCACCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCAGATGGGTATGACTTAGTTGTTGTTGATGCTATGCACAAGGCTAATTATGCCAGTCGAATATGTCATTCTTGCCGACCTAATTGTGAAGCCAAAGTTACTGCTGTTGATGGTAAATATCAAATTGGTATTTATAGCGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTAACAGAGAGCAAGGAGGAGTATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTATGCCGGGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCACATGGAATTCTTGATCGTCATTATTTGATGCTAGAAGCTTGTGAATTAAACTTTGTTTCTGAAGAGGATTATAATGACCTAGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCTGAGGTTCAGGCTGAGGGTGTGTACAACCAAAGGCTTCAGAATCTTGCTGTCACACTTGATAAGGTAAGATATGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGCTGTTTCCTTCCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGAGCTTCTTCAGTGCATAGGTCCTTATGTGGAAGAAGACATCTTGAATGATCTCAAGTCCAAAATTCACGCTCATGATCCTTCAAGTTCTGGTGATATTCAAAAAGAGGTTCGGAAATCTCTATTATGGTTGAGGGACGAGGTCCGGAATCTTTCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTACACCAAGTACTTCTATAGAATACGGGATTATCAAACCATTACTTCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCAAAGTACATTAACAAGTTGGGAGAAGAATTTCAAGAGTATCAAAAGATATATAGTGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGCACAATCAGAGTAATGCAGATCCAGAACGTAGCCTGGCTAGGGCTGGCAGGGGTTGCTTGTATTTACCTGACATTAGTTCCTTTTATGCCAAGGCTCAGAAGCCATCTCGACATCGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGTCCCAGAGATCTTGGCCTAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACTCTACACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAGGCCATGTGGGATCGTTAA 7113 0.4268 MGDGGVVCMPLQYIMERLPNAEKTLCGGKSGNGFNSKLLKFADSERKKMKARKEEPARKSELGLDRVSKRSNDVENGEICGEMVQKEEVEEGELGTLKWPKSDLENGEFVPELLPRRSEIENGEIVSEKWKTRELEKGEIHSGKWRKDDVDKGEVFPEKGRKGEAEKGEYGSWRGTKDDIEKGEFIPDRWYKGEMGKDNYGNSRTHRFHSDRDKGWKSERERTPTSGRYTVDEGFRKKELNKTGSQHAKSSPRWDSGQQRNIRISSKVVDDEKNIHNNGKDPTRDYTSGSRLKRFGNDSDGCEWKRAADYAGLKSRRVSDDSYRHVCSENYSRRSGEQSYRNNNSAKLSADKYSSRNHESSFSTRPAYDRHGRSPGHSERSPRDRGRYYDHRDRTPLHRSPCGRDRSPYYREKSPHGRERSPYTRNRDRGRQHDHKLRSPTCAEQSPQDRVRHHDRRDHTPNLVEGSPLDRAKKDGHQETSCKTLSSEKHNSEYSCKDHEDKNIQRESNGSVTESQGEKSLQVTNESIENDTCCQPVKEQQFCSPTLINKESPCFEPPPEELPSMEEDMDICDTPPHVPVVTDLSSGKWFYLDYGGVENGPAKLCDIKVLVDKGVLMSDHFIKHLDSDRWLTVENAASPTAAQSFQSVMSDTITQLVNPPEAPGNLLADTADILQSGPENYQEMPAPQQPLVCPNDSLLTSEFFEDFHIDERVRNLLEGYDVIPGMELEAIKEALQMNFEYAKGEGLGDYEGFPWHIFCFREDCDSSTDLTSRHSESQLSTGDKDNGYSFGVPSDWFSTCWSCKGGDWKRNDDAQDRYSRKKLVLNNGFPLCQMPKSGCEDPRWPQKDDLYFPSQSRRLDLPPWAFGADEWVDCSAASRSIQSKPASVRGVKGNVLSVVRINACVVKDQGSLDQGSLVSESRQKTRGKDRHHSRSTRPFSSTSDSRRSSTEKDSQSKADSDQGSCRSMEFINIPKDHLCTVHELQLHLGDWYYLDGSGRERGPSSFLELQYFVDQGIIKKHSSVFRKSDKLWVPVTSAAEISDVSLASHQESSSASGACSGLPSKQTQGVSCSEPHTISSLFNCIHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKREIEKPIYLKSEGDAHAAKRARMMVDGSEEDSDLEDVDLTIEKDGSTFEDLCRDASFPEEFGITDSDVGSRGLLDGRVMAQIFHFLRSDLKSLVFASMTCKHWRTAVRFYREVSRQVNLTSLGHSCTDSMLWNIMNAYEKDKISSMILMGCTNITADMLEKILLSFPGLCTVDIRGCNQFGELTPKFANVKWIKSRSSHMTRIAEEPHKIRSLKHITEQTTSVFKSSSLGIDDFGQLKDYFDSVDKRDTAKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKIKTGYYSGRGLSSVKEDISRMCRDAIKAKNRGDVSDMNHIITLFIQLATRLEESSKSVHDRDALLKSWDNSKYKKNRLVNERKYRNNGIHGGLDNVDYTSDREIRRRLSKLNKKSMDSESETSDDLDRSYEDGRSDSGTSTSDTESDQEVHSESIVRESRGDGCFTPGEELDFITDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEENVQRKMRVSLPDDYAEKLSVQKNGTEESDMELPEVKNYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDMILRTLNTQVRNFTGTGSTPMSYALQPVIEDIKRCAEEDYDARTVRMCQGILKAIESRPDDKYVAYRKGLGVVCDKEEGFAQDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGKYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNFVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEAAVSFLWKGEGSFVEELLQCIGPYVEEDILNDLKSKIHAHDPSSSGDIQKEVRKSLLWLRDEVRNLSCTYKCRHDAAADLIHIYAYTKYFYRIRDYQTITSPPVYISPLDLGPKYINKLGEEFQEYQKIYSENYCLGQLIFWHNQSNADPERSLARAGRGCLYLPDISSFYAKAQKPSRHRVYGPRTVRSMLARMEKQSQRSWPKDRIWSFKSSPKFFGSPMLDAVINNSTLDREMVHWLKHRPAIFQAMWDR 2370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 191 523 - -
Gabi2460g00017 2370 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 406 2370 - -
Gabi2460g00017 2370 Pfam SET domain 1877 1940 IPR001214 GO:0005515
Gabi2460g00017 2370 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1951 2370 IPR045606 -
Gabi2460g00017 2370 SMART set_7 1806 1946 IPR001214 GO:0005515
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 363 440 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 447 507 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 296 331 - -
Gabi2460g00017 2370 ProSiteProfiles SET domain profile. 1801 1940 IPR001214 GO:0005515
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 1562 1587 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 915 964 - -
Gabi2460g00017 2370 CDD F-box_SF 1206 1236 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 1562 1621 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 45 68 - -
Gabi2460g00017 2370 SUPERFAMILY F-box domain 1206 1254 IPR036047 GO:0005515
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 137 178 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 245 264 - -
Gabi2460g00017 2370 CDD SET_SETD2-like 1814 1962 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 508 523 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 332 362 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 265 280 - -
Gabi2460g00017 2370 MobiDBLite consensus disorder prediction 191 244 - -
Gabi2460g00017 2370 SUPERFAMILY SET domain 1815 1963 IPR046341 -
Gabi2460g00017 2370 Gene3D SET domain 1771 1971 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2460g00017 Gabi-Chr2460 177196 192098 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi2460g00017 SET 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2460g00017 K22748 - gmx:100776205 3923.63