Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2460g00002 ATGTCTTGCTCAAAGCTCATTTCCTCTTTTCTCTTCTCTCTAACCTTGGTTCTACTTCTCCAAACATCTTTTGGAGCTGACCCTCTTTCCCATTCGTGTTCAAGTTCTGAAAATTTCACATCCAACACTCCCTATGAATCAAACTTGAAAACGCTCATAAACTCACTTATTTACAAAACCCCTTCAACAGGCTTTGGTGTTGGCTCAGTTGGCCAATACCAAAACCAACAAGCATATGGACTCGCTCTTTGCCGTGGCGATGTATCAGCCTCAGAATGCAAAACTTGTGTTTCTGAAGCAACCAAAGAAATCCTCAATCTTTGTCCATACAACAAAGGTGCCATCATATGGTACGATAACTGTTTGTTCAAGTATTTGGACACAGATTTCATTGGCAAGATTGATGAGGCAAACAAGTTCTCTTTGTGGAACGTGCAAAACGTGAGTGATCCTAACATGTTCAACTACATGACCAAGGAATTGTTGAGTGTACTTGCTTACAAAGCTTCTGTTGACCCTAAAATGTATGCATCGGGAAAACTATTAATGATTGGAGAATCAGAGAAAGTTTATGGGTTAGCTCAGTGCACAAGAGACATTACAAGCATGGATTGCAAGAAATGTCTTGATGACGCAATTAGCGAACTTCCAAGTTGTTGTGATGGAAAACAAGGAGGTAGAGTTGTCGGCGGAAGTTGCAACATCCAATATGAGATTTACCCATTTGTTAAAGAGTAG 738 0.4024 MSCSKLISSFLFSLTLVLLLQTSFGADPLSHSCSSSENFTSNTPYESNLKTLINSLIYKTPSTGFGVGSVGQYQNQQAYGLALCRGDVSASECKTCVSEATKEILNLCPYNKGAIIWYDNCLFKYLDTDFIGKIDEANKFSLWNVQNVSDPNMFNYMTKELLSVLAYKASVDPKMYASGKLLMIGESEKVYGLAQCTRDITSMDCKKCLDDAISELPSCCDGKQGGRVVGGSCNIQYEIYPFVKE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2460g00002 245 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 244 - -
Gabi2460g00002 245 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Gabi2460g00002 245 ProSiteProfiles Gnk2-homologous domain profile. 136 242 IPR002902 -
Gabi2460g00002 245 Gene3D - 136 242 IPR038408 -
Gabi2460g00002 245 Gene3D - 26 130 IPR038408 -
Gabi2460g00002 245 FunFam Cysteine-rich receptor-like protein kinase 10 138 242 - -
Gabi2460g00002 245 Pfam Salt stress response/antifungal 147 239 IPR002902 -
Gabi2460g00002 245 Pfam Salt stress response/antifungal 33 125 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2460g00002 Gabi-Chr2460 25244 25981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2460g00002 29 244 Pollen Coat Proteome AT4G20670 40.444 1.26e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2460g00002 - - gmx:100527155 379.407