Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2459g00019 ATGGATCCTCCTCGCCGAGCTCCACGTGCCGTGATCGACCCTATCCCCAAGTTCCGTCAAGTCGGGTTCTTCACTCACGGAGCCCCACCCGAGCGCTCCCAATCGGGTCCACCCGACCCGATTCACTCTTCCCCTCGCGTCTCCAACATCTCCCCCTCCGGCAACTCCCTCTCTCCGGTGATGATCCCGCCGCCGCGCCACCTCTCCGATAACCTACTCCTCCACGCTCGTCCCGCCGCCTCTCCTCTCCGTGCGGATTCTATGACTGCCTCCGGCGGCGGCGGCGGCGGAAGCGGCAGCACCTACGACGCTTCCGATTTCTACCGCGCTCCCGTTTCCCCAGCGCCGTCGTCTTCGTACTCCAGCAGGATCGCTACCGCCGGCGATGGAAGCTTCTTCGACGGCAAGGGGAATAATGCTGGCGGAAAGGTGGCTGCGTCGTCTTTTCCTCGAGGAGGATTTGACTTGACGGCGATGAAGGCGAGCGTTGTTCCGGCGAGCGAATTGACCACTGTTTCCGTGGTGAATGCTTCGCTTGAGATTCCCGAAAAAGAAAAAACAAACAGAGGAGGAGGGTCAGCTATGGAAGTGAAAGACCAACAACCTACTAGTTCAAAACAGCAGAAACCAAAAACCTCAAAAGCTGAAAGGCGAGCTCTTCAAGAAGCTCAACGAGCTGCCAAGGCTGCTACAAAAGCCGAAGGCAATAAGGCATCTGGAACTGCAACTTCAGTGAATGCAAAACCAGCTAAGGCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCAGTTGCAGCCTCTGAGAAGAAGGGAGGTGATTGTCCTCCAGAAAAGGATAGAAAAAAAGATGCACCTCAACCACGCATGCAGTATGATGACAAGAGCCGAGTGGATAAAGCTAAACGACGTGCTGTGGTGAAACAAACTGAAGCTAGGAGCAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACATGGGAGTCAACTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTTATCCTGTGCATCCTGCTGTTTACAAGGTAGGTTTGCAGTATCTATATGGAGATATATCCGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAAGCCATAAAAGACTACAGGGTTCCACTTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTTTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTTAAAAGTCGGATAGCCAAGCTACCTTTGGCCCTGTCTGAGTCAGAAGCTAAAACTTCCCTCCAGTCAGATATTGAGCGTTTTATAGGTGAGAAGATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCTTCATCAGCAGTAGAAATGATACTGTTACATGCACATGAGTTAGGAAAACAGTTTCGTGTTGTGGTAGTTGACTCTCGACCAAAGCTTAGAGGGAAACTTTTACTTCGCAGGCTTGTGGAGAAAGGTCTTAGCTGCACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTAGGAGCTTCATCAGTGTTGTCTAATGGAACAGTATATTCAATAGTTGGGACTGCATGTGTTGCCATGGTTGCTCATGCATTCCGTGTACCTGTCATTGTATGTTGTGAAGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCAATATGCTCGAATGAACTTGGTGATCCAGATGTCATTTCAAATGTTCTGGGTAGAGAGGACATCAACTACTTGGATGGTTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGATCTATGATGCAACACCTTCAGATTATGTTTCGATGATTGTCACAGATTATGGCATGGTCCCCCCAACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 2007 0.4728 MDPPRRAPRAVIDPIPKFRQVGFFTHGAPPERSQSGPPDPIHSSPRVSNISPSGNSLSPVMIPPPRHLSDNLLLHARPAASPLRADSMTASGGGGGGSGSTYDASDFYRAPVSPAPSSSYSSRIATAGDGSFFDGKGNNAGGKVAASSFPRGGFDLTAMKASVVPASELTTVSVVNASLEIPEKEKTNRGGGSAMEVKDQQPTSSKQQKPKTSKAERRALQEAQRAAKAATKAEGNKASGTATSVNAKPAKAVKPAQKVDNAAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVDKAKRRAVVKQTEARSRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYKVGLQYLYGDISGGNARCIAMLQAFQEAIKDYRVPLEKTLVRDLTAKISSYVSFFIECRPLSISMGNAIRFLKSRIAKLPLALSESEAKTSLQSDIERFIGEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSIVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVLGREDINYLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2459g00019 668 SUPERFAMILY NagB/RpiA/CoA transferase-like 341 661 IPR037171 -
Gabi2459g00019 668 MobiDBLite consensus disorder prediction 1 64 - -
Gabi2459g00019 668 MobiDBLite consensus disorder prediction 84 122 - -
Gabi2459g00019 668 MobiDBLite consensus disorder prediction 37 57 - -
Gabi2459g00019 668 Pfam Initiation factor 2 subunit family 359 651 IPR000649 GO:0044237
Gabi2459g00019 668 Coils Coil 213 233 - -
Gabi2459g00019 668 Gene3D - 455 661 IPR042529 -
Gabi2459g00019 668 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 51 665 - -
Gabi2459g00019 668 MobiDBLite consensus disorder prediction 271 306 - -
Gabi2459g00019 668 MobiDBLite consensus disorder prediction 176 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2459g00019 Gabi-Chr2459 328213 333491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2459g00019 5 668 Eukaryotic Initiation Factors Gene Family AT5G38640 65.731 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2459g00019 K03680 - gmx:100775998 1019.61