Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2459g00018 ATGGATCCTCCTCGCCGAGCTCCACGTGCCGTGATCGACCCTATCCCCAAGTTCCGTCAAGTCGGGTTCTTCACTCACGGAGCCCCACCCGAGCGCTCCCAATCGGGTCCACCCGACCCGATTCACTCTTCCCCTCGCGTCTCCAACATCTCCCCCTCCGGCAACTCCCTCTCTCCGGTGATGATCCCGCCGCCGCGCCACCTCTCCGATAACCTACTCCTCCACGCTCGTCCCGCCGCCTCTCCTCTCCGTGCGGATTCTATGACTGCCTCCGGCGGCGGCGGCGGCGGAAGCGGCAGCACCTACGACGCTTCCGATTTCTACCGCGCTCCCGTTTCCCCAGCGCCGTCGTCTTCGTACTCCAGCAGGATCGCTACCGCCGGCGATGGAAGCTTCTTCGACGGCAAGGGGAATAATGCTGGCGGAAAGGTGGCTGCGTCGTCTTTTCCTCGAGGAGGATTTGACTTGACGGCGATGAAGGCGAGCGTTGTTCCGGCGAGCGAATTGACCACTGTTTCCGTGGTGAATGCTTCGCTTGAGATTCCCGGTGAACTTCTTCAAGGAGGAGGGTCAGCTATGGAAGTGAAAGACCAACAACCTACTAGTTCAAAACAGCAGAAACCAAAAACCTCAAAAGCTGAAAGGCGAGCTCTTCAAGAAGCTCAACGAGCTGCCAAGGCTGCTACAAAAGCCGAAGGCAATAAGGCATCTGGAACTGCAACTTCAGTGAATGCAAAACCAGCTAAGGCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCAGTTGCAGCCTCTGAGAAGAAGGGAGGTGATTGTCCTCCAGAAAAGGATAGAAAAAAAGATGCACCTCAACCACGCATGCAGTATGATGACAAGAGCCGAGTGGATAAAGCTAAACGACGTGCTGTGGTGAAACAAACTGAAGCTAGGAGCAGAGTTGAGTTGTTCAGGCATTTACCACAATATGAACATGGGAGTCAACTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTTATCCTGTGCATCCTGCTGTTTACAAGGTAGGTTTGCAGTATCTATATGGAGATATATCCGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAAGCCATAAAAGACTACAGGGTTCCACTTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTTTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTTAAAAGTCGGATAGCCAAGCTACCTTTGGCCCTGTCTGAGTCAGAAGCTAAAACTTCCCTCCAGTCAGATATTGAGCGTTTTATAGGTGAGAAGATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCTTCATCAGCAGTAGAAATGATACTGTTACATGCACATGAGTTAGGAAAACAGTTTCGTGTTGTGGTAGTTGACTCTCGACCAAAGCTTAGAGGGAAACTTTTACTTCGCAGGCTTGTGGAGAAAGGTCTTAGCTGCACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTAGGAGCTTCATCAGTGTTGTCTAATGGAACAGTATATTCAATAGTTGGGACTGCATGTGTTGCCATGGTTGCTCATGCATTCCGTGTACCTGTCATTGTATGTTGTGAAGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCAATATGCTCGAATGAACTTGGTGATCCAGATGTCATTTCAAATGTTCTGGGTAGAGAGGACATCAACTACTTGGATGGTTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGATCTATGATGCAACACCTTCAGATTATGTTTCGATGATTGTCACAGATTATGGCATGGTCCCCCCAACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 2001 0.4748 MDPPRRAPRAVIDPIPKFRQVGFFTHGAPPERSQSGPPDPIHSSPRVSNISPSGNSLSPVMIPPPRHLSDNLLLHARPAASPLRADSMTASGGGGGGSGSTYDASDFYRAPVSPAPSSSYSSRIATAGDGSFFDGKGNNAGGKVAASSFPRGGFDLTAMKASVVPASELTTVSVVNASLEIPGELLQGGGSAMEVKDQQPTSSKQQKPKTSKAERRALQEAQRAAKAATKAEGNKASGTATSVNAKPAKAVKPAQKVDNAAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVDKAKRRAVVKQTEARSRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYKVGLQYLYGDISGGNARCIAMLQAFQEAIKDYRVPLEKTLVRDLTAKISSYVSFFIECRPLSISMGNAIRFLKSRIAKLPLALSESEAKTSLQSDIERFIGEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSIVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVLGREDINYLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2459g00018 666 MobiDBLite consensus disorder prediction 188 304 - -
Gabi2459g00018 666 Gene3D - 453 659 IPR042529 -
Gabi2459g00018 666 MobiDBLite consensus disorder prediction 37 57 - -
Gabi2459g00018 666 MobiDBLite consensus disorder prediction 1 64 - -
Gabi2459g00018 666 MobiDBLite consensus disorder prediction 84 121 - -
Gabi2459g00018 666 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 51 663 - -
Gabi2459g00018 666 Pfam Initiation factor 2 subunit family 357 649 IPR000649 GO:0044237
Gabi2459g00018 666 Coils Coil 211 231 - -
Gabi2459g00018 666 MobiDBLite consensus disorder prediction 269 304 - -
Gabi2459g00018 666 SUPERFAMILY NagB/RpiA/CoA transferase-like 339 659 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2459g00018 Gabi-Chr2459 328213 333491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2459g00018 5 666 Eukaryotic Initiation Factors Gene Family AT5G38640 66.074 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2459g00018 K03680 - gmx:100775998 1002.66