Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2458g00031 ATGCCGGGATTAACGTGCAACGCTTGCAACACAGAGTTCAAGGATGATTCAGAGCAAAAACTCCATTACAAGTCCGAGTGGCATCGCTACAATCTCAAGCGCAAGGTGGCTGGAGTTCCTGGGGTGACCGAAGCACTGTTTCTGGCTAGACAATCTGCACTTGTTCAAGAGAAAGATAAATCGAGTGAAACCCCCATGCTCTATAGCTGTGGCCTTTGTGGAAAGGGGTACAAAAGTTCTAAGGCTCATGCTGAGCATCTTAAATCACGCGGTCATATGATGCGAGCTTCTGAAGGAACTAGTCTTTCAGATGAGAAGGCAATAATTAAGCCACTTCCACAACGTGTTGTGAATAGGCCTCCTCCTAAAAGAGAGGTAGCTAGCTCTGAAAATGAAGAAAGTGAAGATGAATGGGAGGAGGTTGATCCTGAAGATGATTTGGTTAATGATGCTGCAAAGTCCTTGATTGATTTGAAGATGAATGAGCATACCGACAATGGTGATATGGATGAAGATGCTGATGATGATTTTGAGGAGTTAGATCCATCGTGTTGCTTTATGTGTGATCAAGAGCACAATACAATAGAAAGTTGCATGGTTCACATGCACAAGCACCATGGATTCTTCATTCCAGATGTTGAGTATTTGAAGGATCCAAAAGGCCTCCTCACTTATCTTGGCCTTAAGGTCAAAAGGGACTGCATGTGTCTGTACTGCAATGATCGATGTTATCCTTTCAGCAGCTTGGAAGCAGTCAGGAAACATATGGCCGCAAAAGGTCACTGTAAAGTGCATTTCGGTGATGGTGATGATGATGAGGAAGTAGAGTTAGAAGAATTCTACGACTATAGCAGCAGTTATGTGGATGAGCAAGGCAAGCAGCTGGTTGCATCCAGTGATGTGGCTAACAATGTAGAACTCAGTAGTGGTGGGTCTGAGCTCATAATCACTAGGAAATCTGGTGATGGTACATCAACCAGAACACTTGGCTCCCGTGAATTTTTGCGTTATTATCGTCAGAAGCCTCGGCCATCACCAGCAAATAATATGGCAATCACTGCTGCATTGGCTTCAAGGTACAGGAGCATGGGCTTGGCGACTGTCCAATCAAGGCAGCAAATTGTGAGGATGAAAATCTTGAAGGAAATGAATAGGTCAGGTGTGGAGAATATGCGTAGCAAGATAGGGATGAAGAGTAATGTCATCCGGAACCTGCCAAACAATGTCCCATATTAG 1236 0.4434 MPGLTCNACNTEFKDDSEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSALVQEKDKSSETPMLYSCGLCGKGYKSSKAHAEHLKSRGHMMRASEGTSLSDEKAIIKPLPQRVVNRPPPKREVASSENEESEDEWEEVDPEDDLVNDAAKSLIDLKMNEHTDNGDMDEDADDDFEELDPSCCFMCDQEHNTIESCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDCMCLYCNDRCYPFSSLEAVRKHMAAKGHCKVHFGDGDDDEEVELEEFYDYSSSYVDEQGKQLVASSDVANNVELSSGGSELIITRKSGDGTSTRTLGSREFLRYYRQKPRPSPANNMAITAALASRYRSMGLATVQSRQQIVRMKILKEMNRSGVENMRSKIGMKSNVIRNLPNNVPY 411
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2458g00031 411 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Gabi2458g00031 411 MobiDBLite consensus disorder prediction 113 146 - -
Gabi2458g00031 411 SMART c2h2final6 183 205 IPR013087 -
Gabi2458g00031 411 SMART c2h2final6 234 261 IPR013087 -
Gabi2458g00031 411 SMART c2h2final6 68 92 IPR013087 -
Gabi2458g00031 411 SMART c2h2final6 4 28 IPR013087 -
Gabi2458g00031 411 PANTHER ZINC FINGER PROTEIN 622 2 410 IPR040025 -
Gabi2458g00031 411 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Gabi2458g00031 411 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Gabi2458g00031 411 Pfam C2H2 type zinc-finger (2 copies) 185 286 IPR041661 -
Gabi2458g00031 411 SUPERFAMILY beta-beta-alpha zinc fingers 170 242 IPR036236 -
Gabi2458g00031 411 MobiDBLite consensus disorder prediction 131 146 - -
Gabi2458g00031 411 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2458g00031 1 411 C2H2 Transcription Factor Family AT4G31420 66.024 0.0 529
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2458g00031 K14816 - gmx:100796317 682.559