Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2458g00005 ATGAATCTATTGCATATTACAGAAAAAAATGGGGGTCTTGTTTTACTGTCCGAAGACCCACCATCCTATAATCTTATGGAAGCTCTCTTCGGCTCTGTCGCGACCAACCGAAGATCCCCCAAAGGAAAGAGTCAATCAACAAGTCCAAGCTGCGATGCCTCAGCTCCATCAACAAAAAGTTTCCTTCTTGACCCTAGAAAATCACAGAACATTTCTATAGTTTTGAAATCTCTTGCAGTCTCACAAGGTGAAATTCTTGATGCACTCATTGATGGTAAAGGCCTCAATGCAGATACCCTTGAGAAGCTATCTAGAGTTTCACCAACAGAAGAAGAGCAATCTCTTATCCTTGAATACAAAGGAAACCCGGCAAGCGTTGCTGCAGCTGAATCTTTCTTATATCACATCCTCAAAGCTGTTCCTTTAGCCTTTAAGCGCTTAAATGCCATGCTATTCAGGTTTAACTATGACTCCGAGATTCTAGAAATCAAGGAATCTCTGCAGACCCTTGAACTGGGGTGTAAGGAGCTTAAAAGCCAGGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATCGAATGAATGCAGGAACTACTAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAGCTGTCTGATGTGAAGAGCACCAATGGAAAAACAACTTTACTTCACTTTGTGGTTGAAGAAGTAGTCCGCTCTGAAGGAAAATGTGTTGTTCTTAACCGCAATAGCAGCCTGAGCCGTAGTAGCAGCAGAAGCAGCAACAGCAGTGGAAACCATGAGAACAGTGCCACCTCAAATGAACTAAGAGAAAGGGAATATACAACTCTAGGATTACCCCTTGTTGGAGGGATCAGTTCTGAGTTCTCCAATGTTAAGAAAGCAGCACATATAGATTATAACAGTTTAGTTGGTTCTATCTCAGTCCTCTTAACCCGGCTAGGTGAAATTCAAGAGCTTGTTTCGCGGTGTGGAAATGGTGGAGAAGGATCTTTTGTAAAAGAAATGGACCAGTTTCTCAGAAATGCTGAGGAAGAATTGAAATTAGTGAGGGAAAAACAAACATTGGTATTGCAGCTTATCAATAGAACAACACAATATTATCAAGGAGGAGCTTCAAAAGGCACTGCAGAACAAAATCTTTTTAAATGA 1173 0.4152 MNLLHITEKNGGLVLLSEDPPSYNLMEALFGSVATNRRSPKGKSQSTSPSCDASAPSTKSFLLDPRKSQNISIVLKSLAVSQGEILDALIDGKGLNADTLEKLSRVSPTEEEQSLILEYKGNPASVAAAESFLYHILKAVPLAFKRLNAMLFRFNYDSEILEIKESLQTLELGCKELKSQGLFVKLLEAVLKAGNRMNAGTTRGNAQAFNLASLRKLSDVKSTNGKTTLLHFVVEEVVRSEGKCVVLNRNSSLSRSSSRSSNSSGNHENSATSNELREREYTTLGLPLVGGISSEFSNVKKAAHIDYNSLVGSISVLLTRLGEIQELVSRCGNGGEGSFVKEMDQFLRNAEEELKLVREKQTLVLQLINRTTQYYQGGASKGTAEQNLFK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2458g00005 390 MobiDBLite consensus disorder prediction 253 277 - -
Gabi2458g00005 390 Coils Coil 160 180 - -
Gabi2458g00005 390 Gene3D Formin, FH2 domain 17 390 IPR042201 -
Gabi2458g00005 390 SUPERFAMILY Formin homology 2 domain (FH2 domain) 59 384 - -
Gabi2458g00005 390 SMART it6_source 15 386 IPR015425 -
Gabi2458g00005 390 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 390 IPR015425 -
Gabi2458g00005 390 Pfam Formin Homology 2 Domain 28 389 IPR015425 -
Gabi2458g00005 390 MobiDBLite consensus disorder prediction 37 61 - -
Gabi2458g00005 390 Coils Coil 340 360 - -
Gabi2458g00005 390 MobiDBLite consensus disorder prediction 36 61 - -
Gabi2458g00005 390 PANTHER FORMIN-RELATED 25 384 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2458g00005 Gabi-Chr2458 43655 45477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2458g00005 24 389 FH2 protein (formin) Gene Family AT1G70140 55.435 5.65e-130 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2458g00005 - - gmx:100783219 534.643