Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2452g00004 ATGGCACAATTACCTCCTAAGATCCCAAACATGTCACCAAGTTGGCCAGATTTTTCTATTTACCACAATATGCCATCTCTTGCAAATGTTGGCAACAACAACACAAACCATTGTCATCAGCATAATCAGAACCCTTCTTGGGTTGATGAGTTCCTCGACTTCTCCTCCGCCAGGCGCGGTGCTCACCGCCGGTCGGTGAGCGATTCCATCACCTTCCTCGAGGCACCAATGCTTGAAGATTGTCGTGACAACCCTGCCATGCCACATAGTTCTGGAAACGACAATGAGTTCGAAAAGTTTGATGATGATCAATTCATGTCCATGTTCACGGATGAAATCTCTGGTGTCCCCATGCCACCAACCATGTCCTCCTCAAACAATTCAAGCCCTTCGGATCAGAATTTCATCAATGATGAGAAAGAAACGAATCAACCCGAAGAGGAGAAGCAGCAGCAGCACCAATTGAAAAATGAACCAGATGAGGTTGAAAGCCAATGTAAACAAGAAATCACAGAGGCTCCAAATAACACGAATGCTACTTCTTCCAATGACAGAATCACTGACCCCAAGAGAGTCAAAAGAATCTTGGCAAATAGGCAATCAGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCTCCACGGGTTGCATTCTTGGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCCGCCCTTGCCCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGAGAGATAGAGAGACTGAGGCAAATTTATCACCAACAGAACCTGAAGACGATGGATAATGCTGCAGGGTCACCATTGCCATCCCCAGCACAAAAGCCAATATGTGATTCTCAGACGGAAATGGAACAGCTTCTCAATGTTTAA 963 0.4528 MAQLPPKIPNMSPSWPDFSIYHNMPSLANVGNNNTNHCHQHNQNPSWVDEFLDFSSARRGAHRRSVSDSITFLEAPMLEDCRDNPAMPHSSGNDNEFEKFDDDQFMSMFTDEISGVPMPPTMSSSNNSSPSDQNFINDEKETNQPEEEKQQQHQLKNEPDEVESQCKQEITEAPNNTNATSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQIYHQQNLKTMDNAAGSPLPSPAQKPICDSQTEMEQLLNV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2452g00004 320 MobiDBLite consensus disorder prediction 139 166 - -
Gabi2452g00004 320 Gene3D - 189 260 - -
Gabi2452g00004 320 PANTHER BASIC LEUCINE ZIPPER 34 1 306 - -
Gabi2452g00004 320 FunFam Basic leucine zipper 61 189 262 - -
Gabi2452g00004 320 CDD bZIP_plant_RF2 191 241 IPR044759 GO:0003700|GO:0006355
Gabi2452g00004 320 SMART brlzneu 186 250 IPR004827 GO:0003700|GO:0006355
Gabi2452g00004 320 MobiDBLite consensus disorder prediction 117 138 - -
Gabi2452g00004 320 SUPERFAMILY Leucine zipper domain 190 244 IPR046347 GO:0003700|GO:0006355
Gabi2452g00004 320 MobiDBLite consensus disorder prediction 112 166 - -
Gabi2452g00004 320 Coils Coil 269 289 - -
Gabi2452g00004 320 Pfam bZIP transcription factor 190 233 IPR004827 GO:0003700|GO:0006355
Gabi2452g00004 320 MobiDBLite consensus disorder prediction 171 190 - -
Gabi2452g00004 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Gabi2452g00004 320 MobiDBLite consensus disorder prediction 171 185 - -
Gabi2452g00004 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 240 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2452g00004 Gabi-Chr2452 210645 214331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2452g00004 1 267 bZIP Transcription Factor Family AT3G58120 56.757 6.08e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2452g00004 bZIP_1 2.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2452g00004 - - gmx:100101874 460.685