Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2451g00005 ATGGGAAAAGCTCCTTGTTGTTCTAAAGTTGGGTTGCACAGAGGTCCATGGACTCCTCGATTTTTTTTAATTAATTGTAGTGTTGAAGAGAGTCTTGCTCGTTATCGAGCTGATACTCGTGCTGCTAAAGAACTCTTAATTCCTGTTCGAGGGTATGTATCATGTGTTGTTGGATGCCCAGTGGAAGGACCAATTCCTCTCTCAAAGGTGGCATATGTTGCTAAAGAACTATATGATATGGGTTGCTTTGAAATCTCCCTTGGTGACACAATTGGAGTTGGAACTAGGGCTGTGCATGGGTCAAGTCGGGTCAGGTTTTTGTCCGACTCGACCCAATTTGGTTTTTATAGATATTATCCAACTACACCCCATGACAAATAA 381 0.4226 MGKAPCCSKVGLHRGPWTPRFFLINCSVEESLARYRADTRAAKELLIPVRGYVSCVVGCPVEGPIPLSKVAYVAKELYDMGCFEISLGDTIGVGTRAVHGSSRVRFLSDSTQFGFYRYYPTTPHDK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2451g00005 126 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 24 96 IPR043594 GO:0016833
Gabi2451g00005 126 SUPERFAMILY Aldolase 20 95 - -
Gabi2451g00005 126 Pfam HMGL-like 24 97 IPR000891 GO:0003824
Gabi2451g00005 126 Gene3D Aldolase class I 19 110 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2451g00005 Gabi-Chr2451 107945 111487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2451g00005 1 20 MYB Transcription Factor Family AT2G31180 70.000 8.96e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2451g00005 K01640 - gmx:100777073 136.732