Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2450g00012 ATGGCGGCTGCTCTCTCTAATCGCGAAGAGTTCGTGTACATGGCCAAGCTGGCGGAGCAAGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAAAAGGTCTCCGCCGCTGCGGATAATGAGGAACTCACTGTGGAGGAGAGAAACCTCCTCTCCGTCGCCTACAAGAACGTGATCGGCGCAAGACGCGCCTCGTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAAGATCACGTCGCCGTCATCCGCGATTACCGATCCAAGATCGAGTCCGAGCTCTCCGGCATCTGTGACGGCATCCTCAAGCTCCTTGACACCCGCCTCATCCCCTCTGCCGCCTCCGGCGACTCCAAGGTTTTCTACCTCAAAATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGTGGCGAGCGCAAGGAAGCCGCCGAGAGCACCCTCACCGCCTACAAATCCGCTCAGGACATTGCAAATTCTGAGCTGCCACCAACTCACCCTATCAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGGGCTTGCGGCCTTGCAAAACAGGCTTTTGATGAGGCAATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGACAGCACTTTGATAATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGATGGTGCAGATGAAATTAAAGAAGCAGCACCTAAAAACGATGAACAGCAGTAA 783 0.539 MAAALSNREEFVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSGICDGILKLLDTRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGGERKEAAESTLTAYKSAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKNDEQQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2450g00012 260 Coils Coil 14 41 - -
Gabi2450g00012 260 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Gabi2450g00012 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Gabi2450g00012 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Gabi2450g00012 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Gabi2450g00012 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Gabi2450g00012 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Gabi2450g00012 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Gabi2450g00012 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Gabi2450g00012 260 Gene3D - 1 251 IPR036815 -
Gabi2450g00012 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Gabi2450g00012 260 SMART 1433_4 8 251 IPR023410 -
Gabi2450g00012 260 SUPERFAMILY 14-3-3 protein 6 240 IPR036815 -
Gabi2450g00012 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Gabi2450g00012 260 PIRSF 14-3-3 2 250 IPR000308 -
Gabi2450g00012 260 FunFam 14-3-3 protein epsilon 4 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2450g00012 Gabi-Chr2450 121870 124556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2450g00012 6 260 14-3-3 family AT1G78300 91.016 6.12e-173 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2450g00012 K06630 - gmx:100529128 479.174