Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2448g00001 ATGGAAGGGAATTTATCACAGGGAGGTATAATTCAAAGTGGGGCTTCTTTTGGTGGTTTTGATTTGCCAGGATCAATGCGGGTTCATCCTCAAGCACAACATCCACATAACATGAACCAACATCAAACTCACCATCCTTGCCAAGGGTCTTCAGTGCATTCCTCAATTCGTGATGGTTTTCCGCTTACAGTGGGAACCTTGCAGAACTGTGATCAGTCAATGAAAGAGTTTAGTCAGGGAGATAGGAACAAAAACTCAGCAAGTGAGGAAGATGATGAGGAAGGTTTTGATGGTCATCATGAATCAGGTAGAGGGAAAAAGAAGTCACCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTGAGGCTTATGATAACAGCTGTTTCTTATATAGGCGAGGACGCAACTTCTGATGGTGGTGGTGGTGGAAGAAGAAAATTTGTAGTCCTACAGAAAAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCCGAAAGAGGTTACAATGTTTCGCCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTACAAAAGGCTTAATGATATGCTTGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCTCTGTTGGATGTAATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGAAAAATATTAAGCTCAAAACACCTCTTCTATGAAGAGATGTGTTCTTATCATAATGGTAATAGATTGCATTTACCCCATGATCCTGCATTGCAGCGTTCACTGCAGTTAGCTCTCCGAAGTAGAGATGATTATGATAATGATGATAGCAGAAGGTCCTATAATGATGATCACGATGAAGATGATCAAGATGGGGAAACTGATGATCATGATGACTTTGAAGAGAATTATGCTTCCCATGGAGATGGTAGAGGAATCTATGGGGCATTAGGGGGATCTATGAAGAGATTAAAACAAGGGCAAGGCCAAGAAGATGCTACTACTTTTGGAAATTCTTTGAATAATCAGGAGTACAACAAAAGTTCATATCCTCAAGGACAGACGGTCCAATCTGATGCTAATCAAGCTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCGCACTTCAGTTAGAAGAACAGAAGCTACAACTTCAGGTTGAGATGTTGGAACTAGAGAAACAAAGATTCAAGTGGGAGAAGTTTAGTAAGAAAAAAGACCGTGAGTTGGAGAAGCTGAAGCTGGAGAACAAAAGAATGAAGCTTGACAACGAGCGTATTGCTTTAGAACTAAAGCGGAAGGAAATTGGCCCTGGCTCTAACTAG 1332 0.4137 MEGNLSQGGIIQSGASFGGFDLPGSMRVHPQAQHPHNMNQHQTHHPCQGSSVHSSIRDGFPLTVGTLQNCDQSMKEFSQGDRNKNSASEEDDEEGFDGHHESGRGKKKSPWQRVKWTDKMVRLMITAVSYIGEDATSDGGGGGRRKFVVLQKKGKWKSVSKVMAERGYNVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRSRDDYDNDDSRRSYNDDHDEDDQDGETDDHDDFEENYASHGDGRGIYGALGGSMKRLKQGQGQEDATTFGNSLNNQEYNKSSYPQGQTVQSDANQALPESMRAAWLQKQWVESRALQLEEQKLQLQVEMLELEKQRFKWEKFSKKKDRELEKLKLENKRMKLDNERIALELKRKEIGPGSN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2448g00001 443 MobiDBLite consensus disorder prediction 1 58 - -
Gabi2448g00001 443 Pfam Myb/SANT-like DNA-binding domain 113 239 IPR044822 -
Gabi2448g00001 443 PANTHER F16F4.11 PROTEIN-RELATED 1 438 - -
Gabi2448g00001 443 MobiDBLite consensus disorder prediction 263 280 - -
Gabi2448g00001 443 MobiDBLite consensus disorder prediction 263 307 - -
Gabi2448g00001 443 MobiDBLite consensus disorder prediction 75 111 - -
Gabi2448g00001 443 MobiDBLite consensus disorder prediction 97 111 - -
Gabi2448g00001 443 Coils Coil 375 402 - -
Gabi2448g00001 443 MobiDBLite consensus disorder prediction 32 58 - -
Gabi2448g00001 443 Coils Coil 405 437 - -
Gabi2448g00001 443 Gene3D - 116 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2448g00001 Gabi-Chr2448 17800 19917 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi2448g00001 Myb_DNA-bind_4 9.8e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2448g00001 - - gmx:100812134 654.055