Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2447g00022 ATGAAGCTTTCCTTCTCTCTCCCTTCAAAATCCTCATCGAAATCGAACCCTATCAAACCCCCTTCAACCAAACAAGACGATGATGCAAAATCCAAAGACTTGATCACAGAATTCGACCCTTCAAAACCCCCAACAGGTCCCAAATCTCAAACCGTCATCATTCCCCCAATTCAAAATCAATGGAGACCATCCAAGGATAGTGATGATGGTGATGATTATAGGCATCGAGTTCCTCCGCAGAAGGTGCTGCTGCAAAAGTTTAAGGATGATTTGAAGAGGTTGCCGGATGATGAGGGGTTAGATGAGTTTAAGGATGTCCCTGTCGAGGGTTTCGGCGCGGCGCTGCTTGCTGGATATGGGTGGTCTGAAGGGATGGCAATCGGGAAGAAAGCAAAGGAGGATGTGAAGGTGGTGCAATACGAGAGGAGGGCAGGGAAGGAAGGTTTGGGTTTTGTTGGTGATGATCGTCGGAGTAAGAACAAGAAGAAAGATAAGGAGGAAGGCGAAGGAGGAACAAAGGAGAGTGGGAAGATCGTTAGAATTGTTGGGGGAAGAGATGCTGGATCCAAGGCTAGTGTTGTTAGGAGTATTGGGGATGATTGGCTTGTTTTGAAGATTTCCAGGAACGGAGAGCAAGTGAAAGTGAAGATGGATGATGTTGCTGAATTGGGGTCCATAGAAGAAGAGAGGTGCTTGAAGGAATTCAAAATTCAACGTGATGATAAGGATAAAGGGTTGAAGAATAAGCATAAGCATGATAGGGATGATGAAATGAGAGGGCACGGCGGGGTTAAGGTTCAAGAGAAGAAGAGAGTGGATGTTAATGGGGATCGTAGGAAGGACGAACAGGGGAAGAGAAAGGTTTCTTGGCTTACAAATCACATTCGGGTTAGGGTGATTAGCAGAGATTTCAAAGGGGGGCGGTTATATTTGAAGAAGGGAGAGGTTTTGGATGTTGTTGGGCCTAGTACTTGTGATATATCTATGGATGAGAGCAAGGAGATCGTTCAAGGGGTATCCCAAGATCTTCTAGAGACGGCTATCCCTCGGTGTGGGGGACCGGTTCTTGTACTGTATGGTAAACATAAGGGTGCATATGGGAGGCTGATTGAGAGGGATTTGGACCGCGAAATCGGCATTGTTCGGGATGTTGATACCCATGAGCTCCTCAATGTGAAACTTGAACAAATTGCAGAATATGTAGGGGACCCAAGCTTCTTGGGACATTGA 1230 0.4626 MKLSFSLPSKSSSKSNPIKPPSTKQDDDAKSKDLITEFDPSKPPTGPKSQTVIIPPIQNQWRPSKDSDDGDDYRHRVPPQKVLLQKFKDDLKRLPDDEGLDEFKDVPVEGFGAALLAGYGWSEGMAIGKKAKEDVKVVQYERRAGKEGLGFVGDDRRSKNKKKDKEEGEGGTKESGKIVRIVGGRDAGSKASVVRSIGDDWLVLKISRNGEQVKVKMDDVAELGSIEEERCLKEFKIQRDDKDKGLKNKHKHDRDDEMRGHGGVKVQEKKRVDVNGDRRKDEQGKRKVSWLTNHIRVRVISRDFKGGRLYLKKGEVLDVVGPSTCDISMDESKEIVQGVSQDLLETAIPRCGGPVLVLYGKHKGAYGRLIERDLDREIGIVRDVDTHELLNVKLEQIAEYVGDPSFLGH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2447g00022 409 SMART kow_9 348 375 IPR005824 -
Gabi2447g00022 409 SMART kow_9 172 199 IPR005824 -
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 149 177 - -
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 1 20 - -
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 21 37 - -
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 43 63 - -
Gabi2447g00022 409 ProSiteProfiles G-patch domain profile. 108 154 IPR000467 GO:0003676
Gabi2447g00022 409 SMART G-patch_5 106 152 IPR000467 GO:0003676
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 243 268 - -
Gabi2447g00022 409 Gene3D - 294 348 - -
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 1 80 - -
Gabi2447g00022 409 Pfam G-patch domain 95 152 IPR026822 -
Gabi2447g00022 409 PANTHER G PATCH AND KOW-CONTAINING 83 405 IPR045166 GO:0000398
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 64 80 - -
Gabi2447g00022 409 MobiDBLite consensus disorder prediction 149 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2447g00022 Gabi-Chr2447 300640 302599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2447g00022 286 376 C2H2 Transcription Factor Family AT1G55460 34.066 9.53e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2447g00022 K13101 - gmx:100784983 442.965