Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2447g00017 ATGGATTCTAGTTCTGGCAAACACCCCACGAGGCATATTTTGCTCAAGGATTATCTGAGGGACGACCTTAGCTCGTGTTCATCGAGCGGTTTCAAATCGTTCCCGCGCCGACAATGCTGCACAACCGTTGGATTCCTCCTTGAGAAAGATATCCAAAGCCAACGCAAGAGGAGGGACACAATCCCTCGACGCCAGTTATGGGCTCTGCAGAGAGCTTCGGAAGCTGTAATCAACGCCATCAAGTCACTGCCCTGGTCCCAACAGAGTGCTAAAGCTACTGGCCTTCTTTCTAGAAGCTTCTCAAGGAAGCTATTGAGCAGAAGCTTCTGGAGAAAAGCTCCCAAGGAAGATGAGGGAAGCAAAGGTGCCCCGAGGTGGAGGAGATCTTTCCGCGAACTCCTTATGCAGGAACGAGATAACCCGACGTTGTCATCGAATGAGGATACCATATTCAATGCCCCAAACACCACCACCTCTTTTAGCTGGGGAGAGATCGAATTCGCTTTTTCATCAGGCGCCACTTCTTCTCAGAGCTCCACAGATTACGACCTAGTTACGGGTACCAAAGAGACTGCGCCACGTGTCAAGATAGAAGGAGTAACAACATCAACAAGGGATTGGCCAAAAGAGAAAGAACAATTTAGCCCTGTATCGGTACTAGATTGCCCATATGAAGAAGAAGAAGAGATTAAGTCTCATTTCAATTCCACTACTCATTCCTTCATGGAAGTTACGGGAGCCGAACACAAGCATATTCAGAAGAGGCGACATTTTAAAAGCGTGGCTTCACTGGAGCCTGTGGTTTTAGAGAAAAGGATCGCATTGTCAGAACTGGAGGATGGACCACACAACCATTCTGGAACTCAATGTTCAGTATTAGTGCCAAATATGTGTACCCAAAATGGAAACAGGAACGTGCGTCAAGACAACATCGAGGAGAATGCACGTGACCTTGTCAACTTAGTTAAAAGGTCAATTCCATCAAACAGTTGGAAAATTAAGGTAGCAGAGAACTTGCTGTTTGATTACTTCAAGCAGAGCATTGGGGAAAATAATGATATTGATCATTCAAAGAAGCTTAACATTTGCAAGATAGCCGAGGATTGGATAAGTGGGGAACCCCAAGAACTGTATTTGGGTTGGGAAGTGCAGGAAGGAAGGCGTGTCTACATTAGGGAGATGGACAAGTGTAAAGAGTGGAAAAACACTGATCAAGGAATACAACAATTGGTTCTGGATCTGGAAAACGAGGTTCTCACTAGTTTGGTTAACGAGCTAGTTCTTGACCTCACGAAATGCTAG 1302 0.457 MDSSSGKHPTRHILLKDYLRDDLSSCSSSGFKSFPRRQCCTTVGFLLEKDIQSQRKRRDTIPRRQLWALQRASEAVINAIKSLPWSQQSAKATGLLSRSFSRKLLSRSFWRKAPKEDEGSKGAPRWRRSFRELLMQERDNPTLSSNEDTIFNAPNTTTSFSWGEIEFAFSSGATSSQSSTDYDLVTGTKETAPRVKIEGVTTSTRDWPKEKEQFSPVSVLDCPYEEEEEIKSHFNSTTHSFMEVTGAEHKHIQKRRHFKSVASLEPVVLEKRIALSELEDGPHNHSGTQCSVLVPNMCTQNGNRNVRQDNIEENARDLVNLVKRSIPSNSWKIKVAENLLFDYFKQSIGENNDIDHSKKLNICKIAEDWISGEPQELYLGWEVQEGRRVYIREMDKCKEWKNTDQGIQQLVLDLENEVLTSLVNELVLDLTKC 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2447g00017 433 PANTHER OS04G0572500 PROTEIN 10 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2447g00017 Gabi-Chr2447 245534 248143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2447g00017 4 431 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.352 6.87e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2447g00017 - - gmx:102663212 452.595