Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2445g00029 | ATGGGGTGTTTTTCGTGTTTCGATTCGAGGGAGGATGAGAAGCTGAATCCTAATCCTCAGCATGAGAGCCATCATCATCATCATCTTGATCATCATCATAAGCTCCCCTCCAATATTTCCAGATTTCCCTCTGTCTCTGACAAGCTACGCTCAACAACTAATGGAGACTCCAAAAGGGAATTGCCTGCTCTCAAGGACGGACCCGCTGTCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCAGCCGCAACCAAAAACTTCAAGCCCCAATCCTTTATAGGGGAAGGTGGCTTTGGAAGGGTCTACAAGGGACGCCTCGAAACCACCGGTCAGGTTGTTGCTGTTAAACAGTTAGACAGAAACGGTCTTCAGGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTGCACCACCCTAACCTTGTGAATCTTATTGGATACTGTGCGGATGGGGACCAACGCCTTCTAGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCACGATCTTCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGGATGAAAATAGCTGCTGGTGCCGCAAAAGGATTGGAATACCTACATGACCAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAGTCATCGAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAATCTGACGTATATAGTTTTGGGGTAGTATTCTTGGAGCTGATTACTGGCCGTAAGGCCATTGACAGCACCCAGCCTCATGGAGAACAAAACCTTGTCACATGGGCACGTCCGCTGTTCAATGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCGCAGCTGCAGGGACGGTATCCCATGCGTGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGTATTCAAGAACAGGCAGCAGCACGTCCTCTGATTGGGGATGTGGTAACGGCCCTCTCTTATCTGGCCAACCAGGCATATGACCCTAACAATGCTGGGCATGGTTACAGGGGAGCTGGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATTGAAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCGCGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGACAAAGTGTGCAGGGCAGTTTTGATGGTTCTAACACCTAG | 1398 | 0.4728 | MGCFSCFDSREDEKLNPNPQHESHHHHHLDHHHKLPSNISRFPSVSDKLRSTTNGDSKRELPALKDGPAVQIAAQTFTFRELAAATKNFKPQSFIGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDQANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFPKLADPQLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAYDPNNAGHGYRGAGDDKRNRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDGSNT | 465 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2445g00029 | 465 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 165 | - | - | |
Gabi2445g00029 | 465 | FunFam | Serine/threonine-protein kinase PBS1 | 63 | 165 | - | - | |
Gabi2445g00029 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 166 | 379 | - | - | |
Gabi2445g00029 | 465 | MobiDBLite | consensus disorder prediction | 381 | 431 | - | - | |
Gabi2445g00029 | 465 | FunFam | Serine/threonine-protein kinase PBS1 | 166 | 380 | - | - | |
Gabi2445g00029 | 465 | PANTHER | OS07G0668900 PROTEIN | 3 | 375 | - | - | |
Gabi2445g00029 | 465 | CDD | STKc_IRAK | 95 | 363 | - | - | |
Gabi2445g00029 | 465 | MobiDBLite | consensus disorder prediction | 374 | 431 | - | - | |
Gabi2445g00029 | 465 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 212 | 224 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi2445g00029 | 465 | ProSiteProfiles | Protein kinase domain profile. | 89 | 366 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2445g00029 | 465 | ProSitePatterns | Protein kinases ATP-binding region signature. | 95 | 118 | IPR017441 | GO:0005524 | |
Gabi2445g00029 | 465 | Pfam | Protein kinase domain | 92 | 298 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2445g00029 | 465 | SUPERFAMILY | Protein kinase-like (PK-like) | 71 | 363 | IPR011009 | - | |
Gabi2445g00029 | 465 | MobiDBLite | consensus disorder prediction | 11 | 62 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2445g00029 | Gabi-Chr2445 | 207706 | 213050 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2445g00029 | 1 | 453 | Glycoside Hydrolase | AT3G07070 | 55.921 | 2.00e-169 | 481 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Gabi2445g00029 | Pkinase | 1.5e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2445g00029 | K13430 | - | tcc:18608901 | 809.29 |