Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2445g00028 ATGGGGTGTTTTTCGTGTTTCGATTCGAGGGAGGATGAGAAGCTGAATCCTAATCCTCAGCATGAGAGCCATCATCATCATCATCTTGATCATCATCATAAGCTCCCCTCCAATATTTCCAGATTTCCCTCTGTCTCTGAAGACAAGCTACGCTCAACAACTAATGGAGACTCCAAAAGGGAATTGCCTGCTCTCAAGGACGGACCCGCTGTCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCAGCCGCAACCAAAAACTTCAAGCCCCAATCCTTTATAGGGGAAGGTGGCTTTGGAAGGGTCTACAAGGGACGCCTCGAAACCACCGGTCAGGTTGTTGCTGTTAAACAGTTAGACAGAAACGGTCTTCAGGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTGCACCACCCTAACCTTGTGAATCTTATTGGATACTGTGCGGATGGGGACCAACGCCTTCTAGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCACGATCTTCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGGATGAAAATAGCTGCTGGTGCCGCAAAAGGATTGGAATACCTACATGACCAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAGTCATCGAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAATCTGACGTATATAGTTTTGGGGTAGTATTCTTGGAGCTGATTACTGGCCGTAAGGCCATTGACAGCACCCAGCCTCATGGAGAACAAAACCTTGTCACATGGGCACGTCCGCTGTTCAATGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCGCAGCTGCAGGGACGGTATCCCATGCGTGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGTATTCAAGAACAGGCAGCAGCACGTCCTCTGATTGGGGATGTGGTAACGGCCCTCTCTTATCTGGCCAACCAGGCATATGACCCTAACAATGCTGGGCATGGTTACAGGGGAGCTGGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATTGAAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCGCGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGACAAAGTGTGCAGGGCAGTTTTGATGGTTCTAACACCTAG 1401 0.4725 MGCFSCFDSREDEKLNPNPQHESHHHHHLDHHHKLPSNISRFPSVSEDKLRSTTNGDSKRELPALKDGPAVQIAAQTFTFRELAAATKNFKPQSFIGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDQANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFPKLADPQLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAYDPNNAGHGYRGAGDDKRNRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDGSNT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2445g00028 466 MobiDBLite consensus disorder prediction 46 65 - -
Gabi2445g00028 466 SUPERFAMILY Protein kinase-like (PK-like) 72 364 IPR011009 -
Gabi2445g00028 466 MobiDBLite consensus disorder prediction 375 432 - -
Gabi2445g00028 466 MobiDBLite consensus disorder prediction 382 432 - -
Gabi2445g00028 466 Gene3D Phosphorylase Kinase; domain 1 74 166 - -
Gabi2445g00028 466 Gene3D Transferase(Phosphotransferase) domain 1 167 380 - -
Gabi2445g00028 466 FunFam Serine/threonine-protein kinase PBS1 64 166 - -
Gabi2445g00028 466 MobiDBLite consensus disorder prediction 11 41 - -
Gabi2445g00028 466 ProSiteProfiles Protein kinase domain profile. 90 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2445g00028 466 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Gabi2445g00028 466 FunFam Serine/threonine-protein kinase PBS1 167 381 - -
Gabi2445g00028 466 Pfam Protein kinase domain 93 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2445g00028 466 CDD STKc_IRAK 96 364 - -
Gabi2445g00028 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Gabi2445g00028 466 PANTHER OS07G0668900 PROTEIN 3 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2445g00028 Gabi-Chr2445 207706 213050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2445g00028 1 454 Glycoside Hydrolase AT3G07070 56.018 2.16e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi2445g00028 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2445g00028 K13430 - gmx:100777987 806.208