Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2445g00027 ATGGATAAGTCCTCCAGCTTCTCATCAAGAAATAATAGTAGTAATGTTGGAAAGGAGGCCCTCCCACAGGTTCTGGAGGAGGTGGATCGTTTTCTCGACAACAACAACGCCGCCACTCCTATGGTCAGGGAAGTAGTTCCCGATTGTGTTCTTTTGTTATCCAATTTGTTGGATTCTATGGTGGATAAATACAACATCAACATCAACATGGGGAGACACATGACTATAAGTAAGTTTGGGCATGACCCAGAGGATGAAAAGTCCTTTCTAGATGCTGTGGATCGAATCTCCAAGCTCTGCACCACTTTGAGTTGTTCCTCTGCCTTGGACAAAACTAGCTCCGTCCTACAAAAAGCAATGTCTTTCTTGGAGAAAGACCTCTGCGCTCTTCTGCAAGATCCCAAACACAAACATCAATCCAAAACACACAACAAGTCATCCTCCTTTGGTTCTCTTCAGGACTCCGATTTGTGTGCCAATATTCATAGCGAGTCCCCTGCCGCCTCTTTCAACGATCATGATCAGAATGAAGACTTCCCATCTTTCTCTAAAGAAAAACTTTCCATTTTGAACAAGATCGCCACCGCCATGATCCTCTCCGGTTATCAAACAGAGTGTTGCATGGCTTTTGCCCATTTCAGACGAAGCGCTTTCAAAACTGTGTTGCAAAGCTTTGGATACGCAAATGTAACAATGGAAGACATTCATCGAATGCAATGGGAATCGCTGGAAGGAGAAATTATGACGTGGAACAAAGTGGTTCGACATTGCACCACGGTGCTCTTCAACGCCGAGCGAAGGCTGTATGAATCCGTGTTCCCGAATCAACCCTCCATATCTCAGACTCTGTTCAGTGATATTGCACGGGCCGTCATCATCCATTTTCTGACTTTCGCACAAGGTGTGGCTTTAACGAAACCATCAGCGGAGAAACTATTCAAGTTCCTAGATATGTACGAGACCCTGAGGGAAGTGGAGGTTGGCGTTATTGATGTGGAGGAGTTAGCATACGAGACAGCAACAACAAAGGATAGGATTGTAGAGGTTGTCGTTGCCATGTTCTCTGATTTGGAAAACTCCATCAAGAGTGATAATGAAAGGGTTCCTGTCCCCAACGGTGCTGTTCATCCGTTGACTCGTTATGTCATGAATTATCTCAAGTATGCATGCGAGTATAAAGATACGTTGGAGCATGTGTTTCAGCAATGCCTTAATGTTGAGGGAATGAGGATGATTCGGACTCAGATACTACAAAACGAAAACATAGAGGATGATGGGACGCCCAAGAATTCACCTTTTGCGGTTCAGTTAATGACAATCATGAACATTTTGGATGCAAATGTTGAAAAGAAGTCAAAGCTATATAGGGATCCAGCTTTGCGGTATGTTTTTCTAATGAACAATGGGAGATACATGGTGCAGAAGATCAAAGGGTGCGCGGAGCTTCACGAATCCATGGGTGACAATTGGTGCAGGAGGAGGCAATCGGGACTGAGATTGTACCATAAGAATTATCAGAGGGAGACGTGGAGTAAGGTGCTGCGGTGCCTTAACCCGGAGGGTAGTGGGAACAAGGTTTCAAAACAGGTTCTCAAGGAGTGGTTTAAGAGCTTCAATGCCATGTTTGAAGAGATACACAGGACGCAGAGTACTTGGATGGTGAGTGACGAGCAACTTCAGTCCGAACTCAGGGTTTCAATATCTGCTTTGGTCATCCCTGCCTACCGCTCCTTTCTTGGAAGATTCAAACACCATCTTGAATTAGGTAGACATGTTGACAAGTATATCAAGTATCATCCCGAGGACATTGAGATTTTGATTGACGATTTCTTTGATGGAAATGCTACCTCCATGGCCCGAAGGAGAACCTGA 1872 0.4471 MDKSSSFSSRNNSSNVGKEALPQVLEEVDRFLDNNNAATPMVREVVPDCVLLLSNLLDSMVDKYNININMGRHMTISKFGHDPEDEKSFLDAVDRISKLCTTLSCSSALDKTSSVLQKAMSFLEKDLCALLQDPKHKHQSKTHNKSSSFGSLQDSDLCANIHSESPAASFNDHDQNEDFPSFSKEKLSILNKIATAMILSGYQTECCMAFAHFRRSAFKTVLQSFGYANVTMEDIHRMQWESLEGEIMTWNKVVRHCTTVLFNAERRLYESVFPNQPSISQTLFSDIARAVIIHFLTFAQGVALTKPSAEKLFKFLDMYETLREVEVGVIDVEELAYETATTKDRIVEVVVAMFSDLENSIKSDNERVPVPNGAVHPLTRYVMNYLKYACEYKDTLEHVFQQCLNVEGMRMIRTQILQNENIEDDGTPKNSPFAVQLMTIMNILDANVEKKSKLYRDPALRYVFLMNNGRYMVQKIKGCAELHESMGDNWCRRRQSGLRLYHKNYQRETWSKVLRCLNPEGSGNKVSKQVLKEWFKSFNAMFEEIHRTQSTWMVSDEQLQSELRVSISALVIPAYRSFLGRFKHHLELGRHVDKYIKYHPEDIEILIDDFFDGNATSMARRRT 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2445g00027 623 Gene3D Exocyst complex component Exo70 69 621 - -
Gabi2445g00027 623 PANTHER EXOCYST COMPLEX PROTEIN EXO70 19 613 IPR004140 GO:0000145|GO:0006887
Gabi2445g00027 623 Pfam Exo70 exocyst complex subunit 250 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi2445g00027 623 SUPERFAMILY Cullin repeat-like 76 612 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2445g00027 Gabi-Chr2445 200857 202728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2445g00027 21 622 EXO70 exocyst subunit family AT5G13150 48.889 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2445g00027 K07195 - gmx:100784339 772.696