Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2445g00009 ATGGGATCGTGCCTCTCCGCTTCTCCTTCTTCTGATCCTTCTTCTTCTTCTTCTTCTTCTCAATTATCATATGATTATAGTATGGAAATGCGGTTGCACAGAGTTCCTGGCAGACTCTTCTTGAATGGTTCATCTCAGGTTGCATCCTTGTTCTGTAAGCAAGGCAGAAAAGGGATCAACCAGGATGCTGTCCTTCTTTGGGAGAACTTTTGTTCAAAGGAGGATACCATTTTTTGTGGTGTTTTTGATGGGCATGGACCTTATGGCCATATGGTTGCAAAGAAAGTCAGGGATTCTTTACCTTTAAAGCTTATTGCTCAATTGGATTTGCATCCTAACAACAAAGATCCTACTACTGCCACACTCACAGAATCCTTTCTGAAGGCTTGTAAGCTTATAGACAAAGAACTCAAACTCCACCATCTTATTCATTGCTATTGCAGTGGGACTACAGCAGTTACCTTGGTCAAGCAGGGGCACGACCTTGTTATTGCAAATGTCGGGGACTCCAGAGCTGTATTGGGTACCCGAGATCATGAAGATTCCCTTATTCCTGTTCAGTTGACCACCGACCTTAAACCAAATCTTCCAAGGGAAGCAGAGAGGATAAGGCTTTGTAAAGGAAGGGTGTTTGCCCTTGAGAATGAACCTCAGGTTGCTCGAGTTTGGCTGCCAAACGTTGATTCCCCAGGGCTTGCTATGGCAAGGACATTTGGAGATTTTTGCCTGAAGGAATTTGGAGTGATTTCTGTTCCCGATGTCTCATATCACCGCCTCACTGAAAAGGATGAATTTGTTGTATTAGCAACAGATGGGGTTTGGGATGTTTTATCAAACAAAGAAGTTGTGGGCATAGTGGCATCTGTTCCACGGTCTTCTGCAGCTCGAATACTGGTTGAGTCAGCTGTTCAAGCATGGATGACCAAGCTTCCCACTTCTAAGGTTGATGATTGCTCAGTAGTTTGCCTCTTCTTTGATTCTAATTCAGACTTTAAATCACAACGTAAAAATTTGATGATTGGAGGAGTGAAACCTGAACAAAAGCAGCAATAG 1053 0.433 MGSCLSASPSSDPSSSSSSSQLSYDYSMEMRLHRVPGRLFLNGSSQVASLFCKQGRKGINQDAVLLWENFCSKEDTIFCGVFDGHGPYGHMVAKKVRDSLPLKLIAQLDLHPNNKDPTTATLTESFLKACKLIDKELKLHHLIHCYCSGTTAVTLVKQGHDLVIANVGDSRAVLGTRDHEDSLIPVQLTTDLKPNLPREAERIRLCKGRVFALENEPQVARVWLPNVDSPGLAMARTFGDFCLKEFGVISVPDVSYHRLTEKDEFVVLATDGVWDVLSNKEVVGIVASVPRSSAARILVESAVQAWMTKLPTSKVDDCSVVCLFFDSNSDFKSQRKNLMIGGVKPEQKQQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2445g00009 350 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2445g00009 350 SUPERFAMILY PP2C-like 43 327 IPR036457 -
Gabi2445g00009 350 SMART PP2C_4 38 323 IPR001932 -
Gabi2445g00009 350 Pfam Protein phosphatase 2C 54 289 IPR001932 -
Gabi2445g00009 350 Gene3D - 42 327 IPR036457 -
Gabi2445g00009 350 PANTHER PROTEIN PHOSPHATASE 21 323 IPR015655 GO:0004722|GO:0006470
Gabi2445g00009 350 CDD PP2Cc 46 325 IPR001932 -
Gabi2445g00009 350 ProSiteProfiles PPM-type phosphatase domain profile. 47 325 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2445g00009 Gabi-Chr2445 77476 79552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2445g00009 32 329 PP2C-type Phosphatase Gene Family AT1G16220 57.831 1.81e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2445g00009 - - gmx:100802479 487.263