Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2443g00015 ATGGCCCTACTAATCCTTTACCTGTCAGCCCTTTTATCCTTTCTCCTCATAACCCATAGAGTACAAAAAACAGGAAGGAAACCCAAGAAAACTGACTCAAGTTATAACATACCCCCAGGGCCCAGAAAGCTACCTATTATTGGTAATATACACAATTTGGTAGGCTCACAACCCCATCGAAAATTAAGAGACTTGTCCAGAAAATATGGACCCTTGATGCATCTTCAATTTGGTGAGGTTTCTACTTTTGTCATTTCATCACCCGAGTGTGCTAGGGAGATGATGAAAACCCATGATATTAACTTTGCAACAAGGCCTCATATTCTAGCCACAGAAATATTGTCTCATAATTCCACAAATTTAGTTTTTGCTCCTTACGGTAATTATTGGAGACAGCTAAGAAAAATTTGCACGTTGAGGCTGTTGAGCTTAAAACGTGTGAACTCATTCCAACCAACTAGAGAAGAAGAGCTCTCCAATCTTGTCAAAAGGATTGCTTCAGAGAAAGGATCGCCCATCAACCTCACTCAAGCAGTACTTTCTTCAATATATACAATCGCTTCTAGGGCTGCATTTGGCAAGAAATGCAAAGACCAAGAAAAATTCATATCAGTGTCAAAAGAAATAATAAAGGTTGCGGGAGGTTTTGACATAGGAGATTTGTTTCCTTCTATTACGTGGCTGCAATTTATCACTGGTTTGAGGCCTAAGCTTGAGAGGTTGCAAAGAGAAAATGATCGGATAGTGGGAAACATCATCAATGAGCATGAAGAGGAAAAGTCAAAAGCCAAATGTGACCAAGTTAAAGCAGAGGAAGATCTGGTTCATGTTCTCATAAAATATGAGGATGGTAGCAACCAGGATTTTTTCTTAACTAAAAACAGTATCAAGGCCATAATCCAGGACATCATGGGTGCTGGGGGTGAGACATCAGCAACAACCGTAGATTGGGCAATGGCAGAAATGGTAAGGAACCCAAGAATAATGAAGAAAGCACAAGCTGAAGTGAGAGAGGCATTCAATAAGAAAGGAAGGGTTGAAGAAAATTGCATCAATGAACTCAAATATTTGAAATCAATTGTGAAAGAGACACTGAGATTACACCCACCAGGTGTTTTGCTGCCAAGAGAATGTGGTGAAGCATGTGAGATATATGGGTATCACATACCAGCCAAAAGTAAGGTCATATTGAATCTTTGGGCAATTGCAAGAGATACAAACTACTGGACTGAACTGGAGAGGTTTTATCCAGAGAGGTTTATTGGTAGCACTATTGACTACAAAGGAAGTAACTTTGAGTACCTTCCCTTTGGTGCTGGAAGAAGAATATGTCCAGGCAGCACATTTGGTTTGAGAAGGGTTGAGATGGCTCTTGCAATGTTGTTGTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAATGTGAAGAATTGGACATGACTGAGGACTTTGGAATAACAGTTAGAAGAAAAGATGATCTAATCTTGCTTCCTTTTGCTTATGATCCTTTGCCTCTCACATGA 1524 0.399 MALLILYLSALLSFLLITHRVQKTGRKPKKTDSSYNIPPGPRKLPIIGNIHNLVGSQPHRKLRDLSRKYGPLMHLQFGEVSTFVISSPECAREMMKTHDINFATRPHILATEILSHNSTNLVFAPYGNYWRQLRKICTLRLLSLKRVNSFQPTREEELSNLVKRIASEKGSPINLTQAVLSSIYTIASRAAFGKKCKDQEKFISVSKEIIKVAGGFDIGDLFPSITWLQFITGLRPKLERLQRENDRIVGNIINEHEEEKSKAKCDQVKAEEDLVHVLIKYEDGSNQDFFLTKNSIKAIIQDIMGAGGETSATTVDWAMAEMVRNPRIMKKAQAEVREAFNKKGRVEENCINELKYLKSIVKETLRLHPPGVLLPRECGEACEIYGYHIPAKSKVILNLWAIARDTNYWTELERFYPERFIGSTIDYKGSNFEYLPFGAGRRICPGSTFGLRRVEMALAMLLYHFDWKLPNGMKCEELDMTEDFGITVRRKDDLILLPFAYDPLPLT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2443g00015 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Gabi2443g00015 507 Coils Coil 238 273 - -
Gabi2443g00015 507 Gene3D Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 FunFam Cytochrome P450 71D8 30 498 - -
Gabi2443g00015 507 PANTHER OS08G0105600 PROTEIN 61 502 - -
Gabi2443g00015 507 CDD CYP71-like 68 494 - -
Gabi2443g00015 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 Pfam Cytochrome P450 38 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00015 507 Coils Coil 329 349 - -
Gabi2443g00015 507 SUPERFAMILY Cytochrome P450 38 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2443g00015 Gabi-Chr2443 248758 250463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2443g00015 1 501 Cytochrome P450 AT1G13110 40.272 3.42e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2443g00015 - - gmx:100778572 774.237