LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2443g00013	ATGTCAATTTGCTCCAAAAACCAGTTTTGGGATGCTGCAATGGCTAGAAGAAGCCTAATGGTGGTGAGTTTGGCAACTGGTGAGTTTGTCACGCGTGCGAGAGGGCGCGTGGGAGGTTTTCTGGAGATGCGGCCGATGCCGTTGAGATCGCGCTGCCGAGACGAGCACGCCGGTATGTGGTTTGCCGGAAAACTCCACCGGACGGTGGTGGATGACGAAGTCAGAGCTTTTTTCTCCTTTCTCCTCATAACCCTTGTAATACAAAAAACAGTAAAGAACCCCAAGAAAAGTGACTCAACTTATAACATACCCCCAGGGCCCAGAAAGCTACCTATTATTGGTAATATACACAACTTGGTAGGCTCACATCCCCATCGAAAATTAAGAGACTTGGCCAGAAAATATGGACCCTTGATGCATCTTCAACTTGGTGAGGTTTCTACTTTTGTCATTTCATCCCCCGAGTGTGCTAAGGAGATGATGAAAACCCATGATATTAACTTTGCAACAAGGCCTCAAATGCTAGCTACAGAAATATTGTCTTATAATTCCACAGATATAATTTTTGCTCCTTATGGTAATTATTGGAGACAGCTAAGAAAAATTTGCACATTGGAGCTCTTAAGCCTAAAACGAGTGAACTCATTCCAGCCAATTAGAGAAGAAGAGCTCTCCAATCTTGTCAAAAGGATTGCTTCAGAGAAAGGATCGCCCATCAACCTCACTCAAGCGGTACTTTCTTCGATATATACAATCACTTCAAGGGCTGCCTTTGGCAGGAAATGCAAAGAACAAGAAAAATTCATATCAGTGTCAAAAGATTTAATAAAGGTTGCGGGAGGTTTTAACATTGGAGATTTGTTTCCTTCTATTACATGGCTGCAATTTATCTCTGGTTTGAGGCCTAAGCTTGAGAGGTTGCAAAGACAAAATGAGCAGATAGTGGGAAACATCATCAATGAGCATAAAGAAGCAAAGTCAAAAGCCAAAGGTGACCAAGTTGAAGCAGAGGAAAATCTGGTAGATGTTCTCATGAAATATGAGGAAGGAAGCAACCAGGATTTTTTCTTAACTGAAAACAATATCAAGGCCATTATCCAGGACATGTTTGGTGCTGGAGGTGAGACATCAGCAACAACTATAGATTGGACAATGGCAGAAATGGTAAGGAATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGACATTCAATATAAAAAGAACGGTTGATGAAAATTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACACTGAGGTTACACCCTCCAGGTGTTTTGCTGCCAAGAGAATGTCGTGAAGCATGTGAGATAAATGGGTATCACATACCAGCCAAAAGTAAAGTCACACTGAATCTTTGGGCAATTGGAAGAGATCCAAAGTACTGGATTGAGCCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCACTATTGACTACAAAGGGAATAATTTTGAGTACCTTCCCTTTGGTGCTGGAAGAAGAATATGTCCAGGAAGCACGTTTGGTTTGAGAAGTGTTGAGATGGCTCTTGCAATGTTGCTGTACCACTTTGATTGGAAGGTTCCCAATGGAATGAAATGTGAAGAATTGGACATGAGTGAGGACTTTGGAATAACGGTTAGAAGAAAAGATGATCTAATCTTGTTTCCTTTTGTTTATCATCCTTTGTCTGCCACATGA	1722	0.4141	MSICSKNQFWDAAMARRSLMVVSLATGEFVTRARGRVGGFLEMRPMPLRSRCRDEHAGMWFAGKLHRTVVDDEVRAFFSFLLITLVIQKTVKNPKKSDSTYNIPPGPRKLPIIGNIHNLVGSHPHRKLRDLARKYGPLMHLQLGEVSTFVISSPECAKEMMKTHDINFATRPQMLATEILSYNSTDIIFAPYGNYWRQLRKICTLELLSLKRVNSFQPIREEELSNLVKRIASEKGSPINLTQAVLSSIYTITSRAAFGRKCKEQEKFISVSKDLIKVAGGFNIGDLFPSITWLQFISGLRPKLERLQRQNEQIVGNIINEHKEAKSKAKGDQVEAEENLVDVLMKYEEGSNQDFFLTENNIKAIIQDMFGAGGETSATTIDWTMAEMVRNPRVMKKAQAEVRETFNIKRTVDENCINELKYLKSVVKETLRLHPPGVLLPRECREACEINGYHIPAKSKVTLNLWAIGRDPKYWIEPERFYPERFIDSTIDYKGNNFEYLPFGAGRRICPGSTFGLRSVEMALAMLLYHFDWKVPNGMKCEELDMSEDFGITVRRKDDLILFPFVYHPLSAT	573

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2443g00013	573	PANTHER	OS08G0105600 PROTEIN	126	569	-	-
	Gabi2443g00013	573	Pfam	Cytochrome P450	104	553	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	CDD	CYP71-like	134	560	-	-
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	248	266	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	500	510	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	381	407	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	361	378	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	464	488	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	510	533	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gabi2443g00013	573	PRINTS	E-class P450 group I signature	132	151	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2443g00013	Gabi-Chr2443	204440	220834	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2443g00013	78	568	Cytochrome P450	AT1G13110	41.865	9.58e-137	405

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2443g00013	-		-	gmx:100778572	779.63

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