Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2443g00013 ATGTCAATTTGCTCCAAAAACCAGTTTTGGGATGCTGCAATGGCTAGAAGAAGCCTAATGGTGGTGAGTTTGGCAACTGGTGAGTTTGTCACGCGTGCGAGAGGGCGCGTGGGAGGTTTTCTGGAGATGCGGCCGATGCCGTTGAGATCGCGCTGCCGAGACGAGCACGCCGGTATGTGGTTTGCCGGAAAACTCCACCGGACGGTGGTGGATGACGAAGTCAGAGCTTTTTTCTCCTTTCTCCTCATAACCCTTGTAATACAAAAAACAGTAAAGAACCCCAAGAAAAGTGACTCAACTTATAACATACCCCCAGGGCCCAGAAAGCTACCTATTATTGGTAATATACACAACTTGGTAGGCTCACATCCCCATCGAAAATTAAGAGACTTGGCCAGAAAATATGGACCCTTGATGCATCTTCAACTTGGTGAGGTTTCTACTTTTGTCATTTCATCCCCCGAGTGTGCTAAGGAGATGATGAAAACCCATGATATTAACTTTGCAACAAGGCCTCAAATGCTAGCTACAGAAATATTGTCTTATAATTCCACAGATATAATTTTTGCTCCTTATGGTAATTATTGGAGACAGCTAAGAAAAATTTGCACATTGGAGCTCTTAAGCCTAAAACGAGTGAACTCATTCCAGCCAATTAGAGAAGAAGAGCTCTCCAATCTTGTCAAAAGGATTGCTTCAGAGAAAGGATCGCCCATCAACCTCACTCAAGCGGTACTTTCTTCGATATATACAATCACTTCAAGGGCTGCCTTTGGCAGGAAATGCAAAGAACAAGAAAAATTCATATCAGTGTCAAAAGATTTAATAAAGGTTGCGGGAGGTTTTAACATTGGAGATTTGTTTCCTTCTATTACATGGCTGCAATTTATCTCTGGTTTGAGGCCTAAGCTTGAGAGGTTGCAAAGACAAAATGAGCAGATAGTGGGAAACATCATCAATGAGCATAAAGAAGCAAAGTCAAAAGCCAAAGGTGACCAAGTTGAAGCAGAGGAAAATCTGGTAGATGTTCTCATGAAATATGAGGAAGGAAGCAACCAGGATTTTTTCTTAACTGAAAACAATATCAAGGCCATTATCCAGGACATGTTTGGTGCTGGAGGTGAGACATCAGCAACAACTATAGATTGGACAATGGCAGAAATGGTAAGGAATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGACATTCAATATAAAAAGAACGGTTGATGAAAATTGCATCAATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACACTGAGGTTACACCCTCCAGGTGTTTTGCTGCCAAGAGAATGTCGTGAAGCATGTGAGATAAATGGGTATCACATACCAGCCAAAAGTAAAGTCACACTGAATCTTTGGGCAATTGGAAGAGATCCAAAGTACTGGATTGAGCCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCACTATTGACTACAAAGGGAATAATTTTGAGTACCTTCCCTTTGGTGCTGGAAGAAGAATATGTCCAGGAAGCACGTTTGGTTTGAGAAGTGTTGAGATGGCTCTTGCAATGTTGCTGTACCACTTTGATTGGAAGGTTCCCAATGGAATGAAATGTGAAGAATTGGACATGAGTGAGGACTTTGGAATAACGGTTAGAAGAAAAGATGATCTAATCTTGTTTCCTTTTGTTTATCATCCTTTGTCTGCCACATGA 1722 0.4141 MSICSKNQFWDAAMARRSLMVVSLATGEFVTRARGRVGGFLEMRPMPLRSRCRDEHAGMWFAGKLHRTVVDDEVRAFFSFLLITLVIQKTVKNPKKSDSTYNIPPGPRKLPIIGNIHNLVGSHPHRKLRDLARKYGPLMHLQLGEVSTFVISSPECAKEMMKTHDINFATRPQMLATEILSYNSTDIIFAPYGNYWRQLRKICTLELLSLKRVNSFQPIREEELSNLVKRIASEKGSPINLTQAVLSSIYTITSRAAFGRKCKEQEKFISVSKDLIKVAGGFNIGDLFPSITWLQFISGLRPKLERLQRQNEQIVGNIINEHKEAKSKAKGDQVEAEENLVDVLMKYEEGSNQDFFLTENNIKAIIQDMFGAGGETSATTIDWTMAEMVRNPRVMKKAQAEVRETFNIKRTVDENCINELKYLKSVVKETLRLHPPGVLLPRECREACEINGYHIPAKSKVTLNLWAIGRDPKYWIEPERFYPERFIDSTIDYKGNNFEYLPFGAGRRICPGSTFGLRSVEMALAMLLYHFDWKVPNGMKCEELDMSEDFGITVRRKDDLILFPFVYHPLSAT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2443g00013 573 PANTHER OS08G0105600 PROTEIN 126 569 - -
Gabi2443g00013 573 Pfam Cytochrome P450 104 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 CDD CYP71-like 134 560 - -
Gabi2443g00013 573 PRINTS E-class P450 group I signature 248 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 500 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 381 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 361 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 464 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 510 533 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 132 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS E-class P450 group I signature 156 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 Coils Coil 304 339 - -
Gabi2443g00013 573 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS P450 superfamily signature 372 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 PRINTS P450 superfamily signature 501 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 Gene3D Cytochrome P450 96 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2443g00013 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 503 512 IPR017972 GO:0005506|GO:0016705
Gabi2443g00013 573 FunFam Cytochrome P450 71D8 96 564 - -
Gabi2443g00013 573 SUPERFAMILY Cytochrome P450 104 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2443g00013 Gabi-Chr2443 204440 220834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2443g00013 78 568 Cytochrome P450 AT1G13110 41.865 9.58e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2443g00013 - - gmx:100778572 779.63