Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi243g00001 ATGGCAGAACCATCCACCGCCGAAACCACCTCCGCCAGCGATGCTCATCCGCCGGCGCCGGCGCCGGCTTCCTCGTCGCTCAACGTCGTCGGATTAACGAGCGACGAGAACAAGAAGCCTTCTCCCAAGTTCTTGGACGAGCCTGAAGACTCCAACATCCAAGCGGTTTCGTCCGGCGACACTCCGTACACGTCAGCTACCACCTTCGAAGAATTGAATCTCTCACCGGAGCTTTTGAAGGGACTCTACGTGGAGATGAAGTTCCAGAAACCTAGTAAGATCCAAGCCGTAACCTTGCCTATGATCTTGAATCCTCCGAATAGGGATTTGATCGTACACGCGCATAACGGTTCCGGAAAAACCACGTGTTTCCTTCTTGGTATGCTTAGTCGAGTTGATCCAAAGTTGCAGGCTCCTCAAGCTTTCTGCATTTGCCCAACCAGGGAGTTGGCTATTCAGAATACTGAAGTTCTCCGAAAGATGGGAAAGTACACGGGGATTAGCTCAGAATGTGCTATACCAGCAGACAGTAGGGATGCTTTGCCGATAGCGAAACGGGCACCGATTATGGCTCAAGTGGTTATTGGGACCCCTGGCACGATTAATAAGTGGATGAATTATAAGAAACTTGGGGTGACAAGGTTGAAGATTCTTGTTTTTGATGAGGCTGATCAAATGCTTGCTAAGGATGGATTTAAAGATGATTCCCTGAGGATAATGAAAGGAATAGAAAAATTCAATTCTAACTGTCAG 753 0.4861 MAEPSTAETTSASDAHPPAPAPASSSLNVVGLTSDENKKPSPKFLDEPEDSNIQAVSSGDTPYTSATTFEELNLSPELLKGLYVEMKFQKPSKIQAVTLPMILNPPNRDLIVHAHNGSGKTTCFLLGMLSRVDPKLQAPQAFCICPTRELAIQNTEVLRKMGKYTGISSECAIPADSRDALPIAKRAPIMAQVVIGTPGTINKWMNYKKLGVTRLKILVFDEADQMLAKDGFKDDSLRIMKGIEKFNSNCQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi243g00001 251 PANTHER RNA HELICASE 49 241 - -
Gabi243g00001 251 Gene3D - 46 251 IPR027417 -
Gabi243g00001 251 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 101 251 IPR014001 -
Gabi243g00001 251 MobiDBLite consensus disorder prediction 1 64 - -
Gabi243g00001 251 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 67 96 IPR014014 GO:0003724
Gabi243g00001 251 SMART ultradead3 87 248 IPR014001 -
Gabi243g00001 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 244 IPR027417 -
Gabi243g00001 251 Pfam DEAD/DEAH box helicase 93 246 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi243g00001 Gabi-Chr243 6930 9806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi243g00001 31 241 Eukaryotic Initiation Factors Gene Family AT1G72730 32.420 4.74e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi243g00001 K18655 - qsa:O6P43_010208 365.54