Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2439g00023 ATGAGGTGGTGCAGTGAAGTTATCACGGTGTCCGGTGGTACACTTGCTCCTTCCTTCCGCAACATAAGTGTCGTGCTCCAATTTCATAAGCCTCTCTTCAAATTCAAATTCAATGACTCCTTTTCTTCTCTCTCTGTTACCCATCGTAAGCTGTTGGTGGTGCCCAGTGCACGAGCACGAGCACACCCTTCAAGTTCATGTGGCGATTTTGATTTTGGTTTTGTGGTTGTCAATTTCTACCATTTTGTGTTCATCAAAGACCCACAAGCAGAAGTCGCCAAACACCTATCTTTCTTGGAGCTGGAGGGTCTCGACATCAATGGAAGAGTCTATTTGAATGAACAAGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGATGCTCTGGCTTATGTCAACTGGTTAAGAGAGGATAACAGGTTTTCTGACATCCTGGTTCAGATATCTCCATCAGAAAATGGACATGCCTTTCCAACTTTGAAGTTGCGGTATAAGCCTTCATTAGTACAGTTTGAAGGTGGCATATCACATCTTCCTTTGCTTGATCCTTCAATGCGGGCAATACCTTTAACACCTTCAGAATGGAGAAATAGATTGAAAGCAATCAATAAAGCTGATCTTACGTCCAAAGATTATCCTAACAGAAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGGCTCAGCGACCTAATGTGGACTGCTTTAGGAGCACTTCATTCGGTCTGTCTCAGGAAGAGATCACTGTTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAACAAACATATTGATGTATTGCACTGGAGGCATTCGCTGTGACGTATATTCTACAAGACTAAGGCTGCAGGGATTTCAGAATTTGTATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGTCCGGCAGAATGGGTAGGAAATTTGTTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTCCTGTTTACTATCCACAGGCTACAACTGAAGCAGAGACGATGCCAGTTTCTGGATATGATAAGTTTGCAAAATGCTACATATGTAGTTTGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGACTGTAATCTGCTTTTCCTATGCTGCAGAAAATGTGTAAAGGATCTAAGAGGATGTTGTTGTTTGAGTTGCACTACGGCTCCTCGGCTTAGACCTGTTTTAAATGGAGATCAGAGATACAAAAAATGGCACATCTACCGTGATATGGATTTGCAAGGCAAGATGGAAATTTCAACTTTAACCCCCTCATTAACTAAAGCAGCATACCATCATAAGTAA 1341 0.4154 MRWCSEVITVSGGTLAPSFRNISVVLQFHKPLFKFKFNDSFSSLSVTHRKLLVVPSARARAHPSSSCGDFDFGFVVVNFYHFVFIKDPQAEVAKHLSFLELEGLDINGRVYLNEQGINAQYSGPSKDALAYVNWLREDNRFSDILVQISPSENGHAFPTLKLRYKPSLVQFEGGISHLPLLDPSMRAIPLTPSEWRNRLKAINKADLTSKDYPNRNYILLDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEEITVSDPLSNVDKEKTNILMYCTGGIRCDVYSTRLRLQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPPVYYPQATTEAETMPVSGYDKFAKCYICSLEVSELRHRNCANLDCNLLFLCCRKCVKDLRGCCCLSCTTAPRLRPVLNGDQRYKKWHIYRDMDLQGKMEISTLTPSLTKAAYHHK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2439g00023 446 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 73 430 IPR020936 -
Gabi2439g00023 446 Pfam Rhodanase C-terminal 318 399 IPR022111 -
Gabi2439g00023 446 CDD RHOD_YceA 190 309 - -
Gabi2439g00023 446 Gene3D - 183 339 IPR036873 -
Gabi2439g00023 446 SMART rhod_4 202 313 IPR001763 -
Gabi2439g00023 446 Pfam Rhodanese-like domain 215 308 IPR001763 -
Gabi2439g00023 446 Pfam UPF0176 acylphosphatase like domain 75 166 IPR040503 -
Gabi2439g00023 446 Gene3D - 70 169 - -
Gabi2439g00023 446 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 179 329 IPR036873 -
Gabi2439g00023 446 ProSiteProfiles Rhodanese domain profile. 213 316 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2439g00023 Gabi-Chr2439 252901 272405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2439g00023 74 426 Sulfurtransferasese or Rhodanese AT1G17850 68.871 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2439g00023 - - gmx:100814358 716.842