Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2439g00011 ATGGCCGGCACAAACTCAGTTGATGTCATTTTGGATTTTCTCAAGAGGAATCGATTCACAAGAGCCGAGGCAGCTTTGCGCAGTGAGATCAATAACCATCCCGACTTAAATGGCTTCCTTCAGAAGCTTACATTGGAAGAAAAGGCCTCCTGCGATGTACCACAGAATAATAAGGGGAAGCTGGTGCTAGAGATTCAAGGGCCGGATTCTCATGATAGTGTTGAAGTTTCTAAAGAATTGATTGTGAAGGAAATAGAGTGTGGGACTTGTCGAAATTCCATGGAAAGCAAATGGAAAACTGCTGCTCCTTCAACGGTGGGTCGTAATAAATCAGATGAAGTGGCTGGGACAAGTGAAAAAAATCTCACTTTCTCTAAGCGTTCGGAGGACAGTATGCTTGATTTATACTCATGGAAGCTCATTCCCAGCAATGGTCCTGTGGAGCCTTACCAAAATGATGGTGGCAGTAGGGCAAATAATACTTTGAAGGTCTCTGTATCTCAACAATCAAAATATCAAACTAATGAAGCTGTTGATGCAATTGCAGCCAACACCAATTCAATGTCTGCGGAGGAAAATGCTGTGCTTGCTGATAAAAAATCCTCGTGGCTTGGAAGTAGTAGTAAAGCCTATGTGGATCCAAAGTATGACCTTGTGCAAAGCAGAGAAACTAGGGAACTTGATCGGCAGCTTAAATTTAATAGTTCATATCTTAAAGGCAACTTTGCAGATAATCCGTGGTCAAGAACTGATGAGAATGCAAATTCGTCTTCAGACTCCTGCAAAGATTGTTCTGTCAAGACTATCTTCCCCTTCCCGAAGAGGGATATGTCTTCGAGCTTTGATGGTGCAACTTATTCTGACAAAAAAGAGGAAAAAAGAAGGGTAGAAATTAGTGATATTAGGGAACCTAAAAAAGAGCAGGTGGATGAATTTGGGAGAGCTATTTACTTGGGCAAGTCACAAGGCAGTTCTGAACAGAAGTTGATTGGCAGCATAAGTTTTCCTCTTGTGCCTGAAAATCAGAAAGAAGAGTTTCCTAGGCTTCCTCCAGTTAAACTCAAGTCAGAAGATAAGCCCTTGGTTGTTCATTGGGAAGAGAAGTTCGAACGGGATGGACCAACTTCAAAACTCACTGGTCCTGACAGCACTTTGCTTATCGGTTCATATCTGGATGTACCTATTGGACAAGAAATTAACCCTTCAGGCATGAGGAGGGCTGCGGGGGGCAGTTGGTTATCTGTAAGTCAAGGTATAACAGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAGTTGGTGATGGGTTGAGTGAATCTGTTGACTATCCAAATGAATATTGGGACTCCGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCGTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGTACATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCGTACTTCTCTGGTGAGCGATATCTTCAAGCAAATAATGTTGAACAAGTCACAACTTCTGATGATCCTATTGGTCTAACGGTTACTGAAATGTATGGAATGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAACTGAACCTTTCACATGCAGAATCTGTCTGGCAGGGCTTTGTCCCTCAGGCAAATGAAGTCATCATGCTAGGAGATGGGAAGGTTTTGAATGATAGTGTAAGATCACGACTAGAGGATATCTGTATGGACGATGAACAACATGGTTCAGTTAGGTCAATTGGGGTGGGAATCAACAGTGATGCTGCTGATATTGGTAGCGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTAGTGAAGGGGATTTAGAATATTTCCGTGATCGTGATGTTGGGCTTGGTGGTTTGAGACACTCTCATCATGATGTGGATAAGAATTCTATTAAAAAATCAAACAAAAATAAGAAGAAAAATGATAAGAGTGAGTCAAATAAATATGTGATAGGAGGTGATAGGGATGCACCGTTGAAGATGAAAACTCATAGTGATGGTAACTTCTCTTTTCCCCTCTCTTTGAGGGATGGCCAGATGATTCAGGCTGCCTCCAGTAAGTCCCAGTGGTCAAATAACTGCAATGCAGATGAAACTGATGATTGTCTTAATGCATTTGTGGGATCTGATGAAATGGTTGCTTCATGGAGGCAGAAGAGCAGTGATTCTTCACCCGTTAAAAGTTCTAGGGACGAGAATAATGCTAACACAATAAAATCCATAGACTCTTCTCCAACAACAGTCTCAAATTATGGATATTCTGAAAGAGATCATGTCAAGCTAGAAGAGGATGACAAGGTTGGAGATGCAAGGGAAGATGATCTAGGGGCATCGCTAGAAGATGAGGAGGCTGCTGCTGTGCTAGAGCAAGTAAGGCAAATAAAGGCCCAGGAGGAGGAATTCGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAATAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCCGTAATAGCTGGAAGGTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGATCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTGGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTCTTCGGTTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTATATGAGTTTCATAAATTTAATAGAGAATCAGGGGGTGAGGTGTACTTCACAATGCCAAGATTGCAGTCTATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCACAGCCTTGGACTAATACATTGCGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTCGGACTTCCATATGACAAGCAGATTGATATCTGGTCACTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTTCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGGGACACATATAAATACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAAACCAACAGGTTAGAATACTTGATTCCGAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGATCAACCCTAAGAAGCGGCCTTCTGCATCTGAGGCCCTGAAGCACCCATGGTTATCATATCCTTATGAACCCATATCATCTTGA 3567 0.4124 MAGTNSVDVILDFLKRNRFTRAEAALRSEINNHPDLNGFLQKLTLEEKASCDVPQNNKGKLVLEIQGPDSHDSVEVSKELIVKEIECGTCRNSMESKWKTAAPSTVGRNKSDEVAGTSEKNLTFSKRSEDSMLDLYSWKLIPSNGPVEPYQNDGGSRANNTLKVSVSQQSKYQTNEAVDAIAANTNSMSAEENAVLADKKSSWLGSSSKAYVDPKYDLVQSRETRELDRQLKFNSSYLKGNFADNPWSRTDENANSSSDSCKDCSVKTIFPFPKRDMSSSFDGATYSDKKEEKRRVEISDIREPKKEQVDEFGRAIYLGKSQGSSEQKLIGSISFPLVPENQKEEFPRLPPVKLKSEDKPLVVHWEEKFERDGPTSKLTGPDSTLLIGSYLDVPIGQEINPSGMRRAAGGSWLSVSQGITEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTVHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQANNVEQVTTSDDPIGLTVTEMYGMTNDNDLMAQYDGQLMDEEELNLSHAESVWQGFVPQANEVIMLGDGKVLNDSVRSRLEDICMDDEQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDRDVGLGGLRHSHHDVDKNSIKKSNKNKKKNDKSESNKYVIGGDRDAPLKMKTHSDGNFSFPLSLRDGQMIQAASSKSQWSNNCNADETDDCLNAFVGSDEMVASWRQKSSDSSPVKSSRDENNANTIKSIDSSPTTVSNYGYSERDHVKLEEDDKVGDAREDDLGASLEDEEAAAVLEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIFGLPYDKQIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2439g00011 1188 MobiDBLite consensus disorder prediction 101 122 - -
Gabi2439g00011 1188 Pfam Protein kinase domain 877 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2439g00011 1188 CDD PKc_DYRK_like 877 1179 - -
Gabi2439g00011 1188 PANTHER DUAL SPECIFICITY PROTEIN KINASE 411 1179 - -
Gabi2439g00011 1188 ProSiteProfiles Protein kinase domain profile. 877 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2439g00011 1188 SMART serkin_6 877 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2439g00011 1188 FunFam Putative serine/threonine-protein kinase dyrk2 871 958 - -
Gabi2439g00011 1188 MobiDBLite consensus disorder prediction 101 123 - -
Gabi2439g00011 1188 SUPERFAMILY Protein kinase-like (PK-like) 866 1181 IPR011009 -
Gabi2439g00011 1188 MobiDBLite consensus disorder prediction 482 512 - -
Gabi2439g00011 1188 FunFam Serine/threonine-protein kinase ppk15 956 1180 - -
Gabi2439g00011 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Gabi2439g00011 1188 Gene3D Phosphorylase Kinase; domain 1 871 958 - -
Gabi2439g00011 1188 MobiDBLite consensus disorder prediction 661 704 - -
Gabi2439g00011 1188 MobiDBLite consensus disorder prediction 758 795 - -
Gabi2439g00011 1188 Gene3D Transferase(Phosphotransferase) domain 1 931 1179 - -
Gabi2439g00011 1188 MobiDBLite consensus disorder prediction 758 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2439g00011 Gabi-Chr2439 98697 109608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2439g00011 876 1174 MAP Kinase Gene Family AT5G19010 31.661 1.80e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gabi2439g00011 Pkinase 4.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2439g00011 - - gmx:100798608 1861.27