Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2434g00027 ATGGTGTTAGCACTCGCTCTGTTCACAAATAGTTCATGTTCTTGTTCTTCTATGATGTTTCATCCATACCCATTAAACCTTTCGCATTCCCTTCAACTCTCACTTCATTCATCTTCAACCTTGTATCCTCAACATGAAGCTCAAGCCTTGTTCTCCGTCACCAAAACGAACATCAAATCACAACCATTCAACAAGGAGTGTTTCCGATCCTCCGTTCATGCATTCTTGCAGTGCTGCTGCAGTAGCTCACTCGCCATTACTGACGTTGAATTAGGGACGCTCTTCTCTTTGTTTCGAGAAATGGGGATTGTCTATGAGGAAACTCAATTGCTCTTGCTCAATAACCCTGACCTTACGTTGGTGTCAATGGATTCATTGCGTGCTCGGGTTCTATGTCTACAGTCTCTCGGGTTGGATCGTGTTGCCCTGAATTACTTGGTTATGAAGCGTCCAACTGTGCTAACAGATAAGGAAATTGACACCTTGTTAAACTTTTTGAGAGATGAATTGGAAGGACAGCTTGAACAAGCACAGCTGAAGCGCTTTTTATCCGTTACTGAACCAAGATTCTTTGTGGGTTTTCCTCAAAAGATCCAACTCCTTGTTGATCGAGGAATTCCTGTTGATAAGGTTGTCCATGTGCTTAACAAAATAAATTTGACAAAGGCACTTTGTCATAGGTCAATGGATGAAATTGATAGGATCATAACTTTCCTGGAGCCCTTTGGTGGTATTAGTTTGATTATAAGGTGGCCTGCAATTCTCAACTACGATTTGGATAATCAGCTGATTCCAAAAATCAAAGTCCTAACTCAGCTTAATGGTGGAGATGTGCGTGACGTTGGGAAAGTGCTGCATAAGTTCCCAGCAATTTTGAGTTATAGTGTGAAACATGTGGAGCAACATGTTGAGCTCCTTAAGTCTTTTGCAAACCTTGATGACCAAGAGATATTTAAGTTAATACTTGAATTTCCAGCTATAGTTACTAATAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGAATGTGGGTTAGATTCAGGTGATATCTTCAAGTTCTTGATTAAAGCACCTTTGTTTCTAGCGCATTCATTCCGTGAGAACATTGCCTGTAAACTTGTGTTTCTGGTCAAGATTGGGTATAAATATAGGACGAAGGACTTGGCAATGGCAATTGCATTTACCACCAGGTCAAGCTGTGAGAACATACAGAAGGTCATCACTCTATTTTTGAGTTATGGGTTTTCATGTGAAGATATTGTTAATATGAGCAGGATGCAGCCACAAATATTGCAGTATAATCATACTTCATTAGAGAAGAAGATGAAGTACTTGATAGAGGAGATGGACCGTGACATTGAGGAATTACTAGTTTTTCCAGCATTCCTCGGTTACAAATTTGACGACAGAATTAAGCATAGGTATGAAGTAAGAAAGAGTATAAGCGGGGGAGGAATGTCTCTCAATAAGCTTTTAACTGTTTCAACTGAGAGATTCGACAAACGAAAGAAGGCCTCTGCTCTAGGCAATCTGAATTAA 1548 0.4025 MVLALALFTNSSCSCSSMMFHPYPLNLSHSLQLSLHSSSTLYPQHEAQALFSVTKTNIKSQPFNKECFRSSVHAFLQCCCSSSLAITDVELGTLFSLFREMGIVYEETQLLLLNNPDLTLVSMDSLRARVLCLQSLGLDRVALNYLVMKRPTVLTDKEIDTLLNFLRDELEGQLEQAQLKRFLSVTEPRFFVGFPQKIQLLVDRGIPVDKVVHVLNKINLTKALCHRSMDEIDRIITFLEPFGGISLIIRWPAILNYDLDNQLIPKIKVLTQLNGGDVRDVGKVLHKFPAILSYSVKHVEQHVELLKSFANLDDQEIFKLILEFPAIVTNSRERKLRPRIQFLKECGLDSGDIFKFLIKAPLFLAHSFRENIACKLVFLVKIGYKYRTKDLAMAIAFTTRSSCENIQKVITLFLSYGFSCEDIVNMSRMQPQILQYNHTSLEKKMKYLIEEMDRDIEELLVFPAFLGYKFDDRIKHRYEVRKSISGGGMSLNKLLTVSTERFDKRKKASALGNLN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2434g00027 515 FunFam - 74 274 - -
Gabi2434g00027 515 SMART mt_12 424 455 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 SMART mt_12 456 487 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 SMART mt_12 354 385 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 SMART mt_12 245 277 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 SMART mt_12 109 139 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 PANTHER CGI-12 PROTEIN-RELATED 245 505 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 Pfam mTERF 96 344 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 Pfam mTERF 335 502 IPR003690 GO:0003690|GO:0006355
Gabi2434g00027 515 Gene3D Transcription termination factor 3, mitochondrial 275 509 IPR038538 -
Gabi2434g00027 515 Gene3D Transcription termination factor 3, mitochondrial 87 274 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2434g00027 Gabi-Chr2434 263261 265589 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi2434g00027 mTERF 3.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2434g00027 - - gmx:100799904 599.356