Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2434g00026 ATGGTGTTAGCACTCTCTCTGTTTACAAATAGTTCATGTTCTTGTTCTTCAATGATGTTTCATCCATACCCATTAAACCTTTCGCATTCCCTTCAACTCTCACTTCATCCAACTCCATCCTTGTATCCTCAACAAGAAGCTCAAGCCTTGTTCTCCGTCACCAAAACAAACATCAAATCACAACCATTAAACAAGGAATGTTTCCGACCCTCCGATCGTGCATTCTTCCAGTGTCGCTGCAGTAGCTCACTCGCTCTTACTGACACAGCAGCCATTATAAACCCAGTGTCATGTGTGTCTCTTATTGACTCGTGTTTTGTTTCAGGGACGCTCTTCTCTTTGTTTCGAGAAATGGGGATTGGCTATGAGGAAACCCAATTGCTCTTGCTCAATAACCCTGACCTTACATTAGTGTCAATTGATTCATTGCATGCTCGGGTTCTTTGTCTGCAGTCTCTCGTGTTCGATCGTGTTGCCCTTAATCACTTGGTTATGAAGCGTCCAACTGTACTAACAGCTAAGGGAATTGACACCTTGTTAAACTTTTTAAGAGATGAATTGGAAGGACAGCTTGAACAAGCACAGCTGAAGCGCTTTTTATCCGTTATTGAACCAAGATTCTTTGTGGGTTTTCCTCAAAAGGTCCAACTCCTTGTTGATCGAGGAATTCCTGTTGATAAGATTGTTCATGTGCTTAACAAAATAAATTTGACAAAGGCACTTTGTCATAGGTCAATGGATGAAATTGATAGGATCATAACTTTCCTAGAGCCCTTTGGTGGTATTGGTTTGATTGTAAGATGGCCTGCAATTCTCAACTACGATTTGGATAATCAGCTGATTCCAAAAATCAAAGTCCTAACTGAGCTCAATGGTGGAGATGTGCGTGACGTTGGGAAAGTGCTTCATAAGTTCCCAGCAATTTTGAGTTATAGTGTGAAACATGTGGAGCAACATGTTGAGCTCCTTAGGTCTTTTGCAGGCCTTGATGACCAAGAGATATTTAGAATAATACTTGTATACCCAGGAGTCGTTACTGCAAGCAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGAATGTGGGTTAGATTCAGGTGATATCTCCAAGTTCTTGATTAAAGCACCCTTGTTTCTAGCTCATTCATTCCGTGAGAACATTGCCTTTAAACTTATGTTTCTGGTCAAGATTGGGTATAAATATAGGACAAAGGAATTGGCAACTGCAATTGCATTTACTACTAGGACAAGCTGTGAGAACATGCAAAAGGTCATCTGTCTATTATTGAGTTATGGGTTTTCGTGTGAAGACATTGTTACTATGAGCAGGAAGCAGCCACAAATATTGCAGTATAATCATACTTCTTTAGAAGAGAAGATGGAGTACTTGATAGAGGAGATGGACCGTGACATTGAGGAGTTACTAATTTTTCCTGCTTTCCTTGGTTATAATTTTGATAACAGGATTAAGCATAGGAATGAAGTAAGAAAGAGTATAAGCGGGGGACGAATGTCTCTCTGTGAGCTTTCAACTCAGAGATTTGGCAAACGAAAATGA 1563 0.4031 MVLALSLFTNSSCSCSSMMFHPYPLNLSHSLQLSLHPTPSLYPQQEAQALFSVTKTNIKSQPLNKECFRPSDRAFFQCRCSSSLALTDTAAIINPVSCVSLIDSCFVSGTLFSLFREMGIGYEETQLLLLNNPDLTLVSIDSLHARVLCLQSLVFDRVALNHLVMKRPTVLTAKGIDTLLNFLRDELEGQLEQAQLKRFLSVIEPRFFVGFPQKVQLLVDRGIPVDKIVHVLNKINLTKALCHRSMDEIDRIITFLEPFGGIGLIVRWPAILNYDLDNQLIPKIKVLTELNGGDVRDVGKVLHKFPAILSYSVKHVEQHVELLRSFAGLDDQEIFRIILVYPGVVTASRERKLRPRIQFLKECGLDSGDISKFLIKAPLFLAHSFRENIAFKLMFLVKIGYKYRTKELATAIAFTTRTSCENMQKVICLLLSYGFSCEDIVTMSRKQPQILQYNHTSLEEKMEYLIEEMDRDIEELLIFPAFLGYNFDNRIKHRNEVRKSISGGRMSLCELSTQRFGKRK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2434g00026 520 Pfam mTERF 354 510 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 Pfam mTERF 113 398 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 SMART mt_12 371 402 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 SMART mt_12 299 330 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 SMART mt_12 441 472 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 SMART mt_12 473 504 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 Gene3D Transcription termination factor 3, mitochondrial 327 520 IPR038538 -
Gabi2434g00026 520 Gene3D Transcription termination factor 3, mitochondrial 110 210 IPR038538 -
Gabi2434g00026 520 PANTHER CGI-12 PROTEIN-RELATED 264 516 IPR003690 GO:0003690|GO:0006355
Gabi2434g00026 520 FunFam - 93 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2434g00026 Gabi-Chr2434 251237 252873 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi2434g00026 mTERF 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2434g00026 - - gmx:100799904 561.992