Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2434g00009 ATGAATCCAAAAAAACTTAGTGGTGTAATTATAGTTTTGGTCATATATTTGTTGAATCAAAATGCTCATTCTCAGCTGCAGGTTGGGTTTTACACCTATTCATGTTTCATGGCTGAGTTCATTGTAAAGGAAGAGGTCAGAAAAAGTATTACTAAGGATCCTGGACTTGCTGCAGGGCTTATAAGAATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCATCGGTACTTCTTGATTCCACTCCCTCAAACACCGCAGAGAAAGATTCACCAGCCAATAAACCAAGTCTCCGAGGGTATGAAGTCATTGATAATGCCAAGGCTAGACTTGAGGCAGCATGCAAAGGAATTGTTTCATGTGCTGACATAGTTGCATTTGCAGCAAGGGATAGCTTGGAGTTAGTTGGAGGACTAGGCTATGATGTTCCTGCAGGAAGAAGAGATGGTAGAATATCACTAGCTTCAGATACAAGAACAGACTTGCCTCCTCCAACTTTCAATGTTAACCAACTCACTCAACTCTTTGCAAAGAAGGGGTTAACACAAGAAGAAATGGTCACTCTGTCTGGAGCACACACCGTTGGCCGTTCTCATTGCTCAGCTTTCAGCAACAGATTGTACAATTTCAGCAGTACTTCAATCCAGGATCCAAGTTTAGATCCCTCATTTGCAGCACTGTTGAAGAAGCGATGTCCACAAGGCAGCACAAACCAAAACTTGGTGGTTCCAATGGACCCTTCAAGCCCTGGAGTTGCAGATGTAGGGTACTATATTAATATCTTGGCAAACCGAGGCCTGTTCACATCTGACCAGGCTCTCTTGACTAACATGGAAACAGCCAGCCAAGTGAATCAAAATGCTAGGAATTCCTATCTATGGGCAAGCAAATTTGCAGATGCAATGGTGAAGATGGGTCAAATTAGTGCCTTAACAAGTGATGCAGGAGAGATTAGAACAAATTGCAGGGTGGTCAATAGCTAG 984 0.4258 MNPKKLSGVIIVLVIYLLNQNAHSQLQVGFYTYSCFMAEFIVKEEVRKSITKDPGLAAGLIRMHFHDCFIRGCDASVLLDSTPSNTAEKDSPANKPSLRGYEVIDNAKARLEAACKGIVSCADIVAFAARDSLELVGGLGYDVPAGRRDGRISLASDTRTDLPPPTFNVNQLTQLFAKKGLTQEEMVTLSGAHTVGRSHCSAFSNRLYNFSSTSIQDPSLDPSFAALLKKRCPQGSTNQNLVVPMDPSSPGVADVGYYINILANRGLFTSDQALLTNMETASQVNQNARNSYLWASKFADAMVKMGQISALTSDAGEIRTNCRVVNS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2434g00009 327 PANTHER PEROXIDASE 25-RELATED 15 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Gabi2434g00009 327 ProSiteProfiles Plant heme peroxidase family profile. 25 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gabi2434g00009 327 FunFam Peroxidase 163 305 - -
Gabi2434g00009 327 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2434g00009 327 Gene3D - 29 326 - -
Gabi2434g00009 327 FunFam Peroxidase 29 174 - -
Gabi2434g00009 327 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Gabi2434g00009 327 Gene3D Peroxidase, domain 2 163 305 - -
Gabi2434g00009 327 Pfam Peroxidase 42 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2434g00009 Gabi-Chr2434 113495 114946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2434g00009 23 327 Peroxidase AT1G05260 50.814 4.74e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2434g00009 K00430 - gmx:100779031 561.222