Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2434g00005 ATGGGTGCGGTTGACTGTTATCCATCGCGTGAGGATGAGATGGCGGTGTTGTCTCTGAATTCTCTGCCTTTAGGTTTCCGATTCCGGCCTACGGATGAGGAACTCATCGATTACTACCTGCGACAGAAGATCAACGGAAATGGTGACGAGGTTTGGGTTATTCGAGAGATTGATGTCTGCAAGTGGGAACCCTGGGATTTGCCTGATTTGTCAGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCTCAGGACCGCAAGTATCCAAATGGGCATCGATTGAACCGAGCAACTACTCATGGTTATTGGAAGGCAACAGGGAAGGATCGTCAAATCAAGTCTTGTTCAAGCTTGATTGGGATGAAGAAGACTTTAGTCTTCTATACTGGTCGTGCACCTAAAGGGAAGAGGACCAATTGGGTTATGCATGAGTACCGACCCACCCTCAAGGAACTTGATGGTACCAATCCTGGACAGAATGCGTATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGTCTTGAAGTTTCAAACTGTGATGAAGTGGAGCAGACTGCTTCAAATCCTTTGGCTGCTAAGGACTCTCCTGAAGAAATACAATCTGATCCAGCTCTTGTTGCAGTATCTCCGTCACAGATTACGGATGATGATAAGCACCTGGCAGTTATCCCTGAGATCTCTGATGAAACAATATCCAACATTATAACCCCTGTTGATTGCCATAGTGACGGATGTGATGCTTATGATGCACAAAATCAAATTGTAGATCCAGCTGCGGAGGAGGGTCAGCCGTTGAAATATGACATATATTATGACCCAAAGAACGAGCTATTTGATGGCAAATTATTTTCCCCAGAACTTGTGCACATTCCACCAGAATTTAATTTTCAAGCAAACGATGAGTCAGATGGTCGTTGGGGGCTTCAATATGGCACAAATGATTTACATTTTTCGGACGTTTTTGATTCATTTTTTAATTGGGATGAACTCTCCAATGCGGAGTCTGGCAGCCAACAGCAGAGCTCTCCCTTGTTTAATGTTAAGGACAATGGATCAGGCAGTGATTCAGATGTGGAAGTAGTCAATAAGACATGTAAGCAAGATGCTTATCCTGAGGAGGCAAGTGACAGAAAGATTCCTTTGGTGCCAACTCCAGAATTTTGCAAAACCATAGGCAAAACCTTTGACTGTAGTGGGGGTGAGAAGAATAGCAATGTTGGATTATTTCAAAACAATTCCCAGATGGCTTCCTCGTTTGATGTTAGTATGGATCAAGTGTACAATGTATTCAATGCTTATGAGCAACCAAGAAACTATAATCCAGTTGCTAGTGATGATACTGGAATCAAAAGAAGGAGTCGGCAGGTACGAAATGAACAGCCAAACATAAACATCATGGCGCAAGGTACTGCACAAAGGAGAATTCGTTTGTTAAGGATGACGGATAACTCGAATGAGACGGTGGCAGTGGAGAAGGAAGCTTCAGAAAATCATGGTGATGATGAAAGTGCGATTGTTGCTGATAATGTGAATGAACTGCACAAGACACCTGAATCAACCGACAGTAGAAAGATTTCTCAACAAGTTGCCAATGCAGGTTCCACCTTGGGGTTAAAAGAGGTTTTATTGCAAAGAAGGGTGCCTTACATATCAAAGGCTTCCTCCAATCGCACTGTGTGGTCTTCTGTTTTTGTAGTTTCTGCCTTTGTAATGGTCTTGTTAGCGGTCTTTGCTAACATATGGGGATATCTTAAATTTTGA 1770 0.4294 MGAVDCYPSREDEMAVLSLNSLPLGFRFRPTDEELIDYYLRQKINGNGDEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRQIKSCSSLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTASNPLAAKDSPEEIQSDPALVAVSPSQITDDDKHLAVIPEISDETISNIITPVDCHSDGCDAYDAQNQIVDPAAEEGQPLKYDIYYDPKNELFDGKLFSPELVHIPPEFNFQANDESDGRWGLQYGTNDLHFSDVFDSFFNWDELSNAESGSQQQSSPLFNVKDNGSGSDSDVEVVNKTCKQDAYPEEASDRKIPLVPTPEFCKTIGKTFDCSGGEKNSNVGLFQNNSQMASSFDVSMDQVYNVFNAYEQPRNYNPVASDDTGIKRRSRQVRNEQPNINIMAQGTAQRRIRLLRMTDNSNETVAVEKEASENHGDDESAIVADNVNELHKTPESTDSRKISQQVANAGSTLGLKEVLLQRRVPYISKASSNRTVWSSVFVVSAFVMVLLAVFANIWGYLKF 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2434g00005 589 FunFam Nac domain-containing protein 86 31 175 - -
Gabi2434g00005 589 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 260 - -
Gabi2434g00005 589 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Gabi2434g00005 589 MobiDBLite consensus disorder prediction 335 361 - -
Gabi2434g00005 589 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Gabi2434g00005 589 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Gabi2434g00005 589 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2434g00005 Gabi-Chr2434 56172 59583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2434g00005 14 501 NAC Transcription Factor Family AT4G35580 42.339 3.22e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2434g00005 NAM 3.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2434g00005 - - gmx:100777071 806.979