LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2434g00002	ATGGGAATTGTGAAGGAATTGTTCAGTTGGTCGCAGGCTGTGATGAGCATGTTATTAGTGCAAATTTTTGCAACTGGGATGCAGATTCTATCAAGGATCATACTAGTTGAAGGCACTTTCATTTTTGCACTAATTGCCTATCGTCATGTTGTTGCTGCTGTTTGTGTTGCCCCTTTTGCTTTCTATTTTGAAAGAGGCATCACGAAGAAGTTGGGGTGGTCGATTTGGTTTTGGCTCTTCCTTAATGCCTTAGTGGGAATAACACTGGCTATGGGACTGTTCTATTATGGTCTGCGAGACACCTCAGCTACTTACTCTGTCAACTTTCTCAACTTGGTTCCAATTTTCACCTTCACTATCTCTGTTATATGCAGAATGGAGAGGCTGTGTCTGCAAAGATGGTCGAGTAAAGTGAAGACTGTGGGGGCAATTTTGTGTGTTGGTGGAGCATTAACAACTAGTATATACAAGGGAAAGGAATTCCATGTTGTTCAAAGTAATCATCACACTCACAGTACTATTGAGGCATCCAAAACCAACATGCTTCGTGGCACTCTCTTTTTGGTTGGTAGCTGCTTGTCATACACAGCTTGGTTCATTGTGCAAGTTAAGTTGCTTAAAGTATTTCCATTGAAGTATTGGGGAACAATGCTTACCTGCATTATAGCATCAATTCAAGCAACCATAGTAGGGATATGCTTAGATTGCAGAAAAGTTACTTGGAGTTTGAAGTGGAATCTACAACTTATCACAATAATATATTCGGGAGCACTGGCTACAGCTGCTACGTTTTGCTTAATATATAGAGTAATTGCAATCAAAGGACCTACTTATCCCGCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCCATATCAGAAGCTATCTTACTGGGTGAACCAATCAGACTTGGCATTTTGCTAGGCATGGTCTTGATCCTAATTGGATTGTACTCCTTTTTGTGGGGTAAAAGGAAGGAGACACAATGCTTGCCTCAACCAAATATAGAAGCCGGACAAGTATCAACAAGCATGGTTGTTGCTGAGTCTGCTGGAGTGCACGCAACAGCATTAGTAGTACCAAGTTCTTCACCTAATGTTGAAAAGACTGACAGAAATTGA	1122	0.41	MGIVKELFSWSQAVMSMLLVQIFATGMQILSRIILVEGTFIFALIAYRHVVAAVCVAPFAFYFERGITKKLGWSIWFWLFLNALVGITLAMGLFYYGLRDTSATYSVNFLNLVPIFTFTISVICRMERLCLQRWSSKVKTVGAILCVGGALTTSIYKGKEFHVVQSNHHTHSTIEASKTNMLRGTLFLVGSCLSYTAWFIVQVKLLKVFPLKYWGTMLTCIIASIQATIVGICLDCRKVTWSLKWNLQLITIIYSGALATAATFCLIYRVIAIKGPTYPAMFNPLALIFVAISEAILLGEPIRLGILLGMVLILIGLYSFLWGKRKETQCLPQPNIEAGQVSTSMVVAESAGVHATALVVPSSSPNVEKTDRN	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2434g00002	373	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	154	-	-
	Gabi2434g00002	373	PANTHER	WAT1-RELATED PROTEIN	13	333	IPR030184	GO:0016020\|GO:0022857
	Gabi2434g00002	373	Pfam	EamA-like transporter family	14	150	IPR000620	GO:0016020
	Gabi2434g00002	373	Pfam	EamA-like transporter family	183	320	IPR000620	GO:0016020
	Gabi2434g00002	373	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	245	326	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2434g00002	Gabi-Chr2434	11888	18063	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2434g00002	11	370	Nodulin-like Gene Family	AT5G07050	31.332	5.72e-61	199