Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2432g00037 ATGGGAAGGAGTCCTTGTTGTTCTAAGCAAGGTTTGAACAAAGGAGCATGGACAGCTATAGAAGACAAAATTCTCACAGAATACATAAAGATTCATGGCGTAGGAAAATGGAGACACCTGCCCAAAAGAGCAGGTCTCAAGAGATGCGGGAAAAGTTGCAGGCTAAGATGGTTGAATTATCTAAGGCCTGGCATTAAAAGAGGAAATATTACTAGCGATGAAGAGGACCTTATTATCAGGCTTCACAACCTTCTTGGAAACAGGTGGTCCTTGATTGCTGGACGGCTTCCAGGACGAACAGACAATGAAATCAAGAACTACTGGAATACCAATATTGGAAGGAAACTTCGAAATGTTACCCCAAACAGTTCCATTATGAGTGGTTCACGAAGCTCATTGCACTCAGCTCAAGAAGATCCTAACCTCAAAACTCAAGAGTGGAACTGTCCTTACCCACCAAATAAGGATTCATGCGTAGTTCATCCTAAAGCAACAAGATGGACTAAGGTCACAGTACTCACTAGAGAAATTATTCAACTAAATGAGAATATTGAAGGGATCAATGTCGGTGATAACAAGATGAAGGGATCACCAGTGTCAGTGTCACCATCTTCAGAGTGTAACATTGATCCATTGGATTTCATGGAAGATTTTGAGATGGATGGCAATTTCTTTTCGGAGCTCCTCAAGATGGATTTTCCTGAACCATCATTTTTGGAAAATAAGATAATGGAAGACAATGGTAACCCTAGCTTAGTCGACAAGGGCCATAATTTGTGTCCAAAATCATACAATGATGCCCACTTCCCTTGGGGTAATTCATTGTATGATACAGATTTTGATTTTCAATCAGTGGCTACTTATATGGAGTCCGGATTTGATTGGCTTTGA 891 0.4063 MGRSPCCSKQGLNKGAWTAIEDKILTEYIKIHGVGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITSDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLRNVTPNSSIMSGSRSSLHSAQEDPNLKTQEWNCPYPPNKDSCVVHPKATRWTKVTVLTREIIQLNENIEGINVGDNKMKGSPVSVSPSSECNIDPLDFMEDFEMDGNFFSELLKMDFPEPSFLENKIMEDNGNPSLVDKGHNLCPKSYNDAHFPWGNSLYDTDFDFQSVATYMESGFDWL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2432g00037 296 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gabi2432g00037 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gabi2432g00037 296 CDD SANT 16 61 IPR001005 -
Gabi2432g00037 296 Gene3D - 70 143 - -
Gabi2432g00037 296 FunFam MYB-related transcription factor 13 66 - -
Gabi2432g00037 296 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gabi2432g00037 296 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Gabi2432g00037 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gabi2432g00037 296 SMART sant 13 63 IPR001005 -
Gabi2432g00037 296 SMART sant 66 114 IPR001005 -
Gabi2432g00037 296 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gabi2432g00037 296 CDD SANT 71 112 IPR001005 -
Gabi2432g00037 296 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gabi2432g00037 296 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 154 - -
Gabi2432g00037 296 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2432g00037 Gabi-Chr2432 283116 284800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2432g00037 1 123 MYB Transcription Factor Family AT4G38620 72.000 2.40e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi2432g00037 Myb_DNA-binding 2.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2432g00037 K09422 - gmx:100809225 414.461