Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2432g00036 ATGGGTAGACACCCTTGCTGTCCCAAAGAAATCAACAAAGGTGCTTGGTCTAGAGAAGAAGATGAAACCCTCTCCAAATATGTTGCCCTCCATGGAGAAGGGAAATGGCAAAAGGTTGCCCAAAATGCAGGTTTAAAACGGTGTGGAAAGAGTTGCAGACAAAGATGGTTGAATTATCTCAGGCCTGGTATAAAGAGAGGTAACATCTCTGTGGATGAAGAGGATATGATCATAAGACTTCATCGTCTTCTTGGTAACAGATGGGCTTTGATAGCTAAGAGGCTACCGGGACGAACAGACAATGAAATCAAGAACTATTGGAACACTAACCTATCAAAGAAGTTACAGAAACAAACTTCATCATCTGCTTCACTTCAACAACAACAACAACACAACCCCAATCACAAATGTGAAGACAAGAAGACCAAACAAATCCATGTAGCACCTGAAGCTCCAAGGCCTAGGAGAGTTAAGGCTGTTCAATACAGTAAAATTTTGGAGAACACTGGGTGTGATGATAGGCAGAGTCCTAGTCCCTCAACTAAAATAGAGGGTAGTGATGAAGCTTCTCTTACTGATTTTCTCATTGATATTGATCAAAACCAAATGCTGATTGTTGATGACTCTAACTCAATGCTCCCACAAATTGAAGACCACAAGGTAGGCTTAACCAACAGTCCTAGCTCATCATCACCTTCTGATTATTGCCACCTCTTACCAGAGAGATTTGATTCTCTTGAGACCCTTTTTGATGTGGAGCTCAAGAGGATGGCTTCCTTTCTTGGATTGGAAATTGATTGA 801 0.4145 MGRHPCCPKEINKGAWSREEDETLSKYVALHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLRPGIKRGNISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQKQTSSSASLQQQQQHNPNHKCEDKKTKQIHVAPEAPRPRRVKAVQYSKILENTGCDDRQSPSPSTKIEGSDEASLTDFLIDIDQNQMLIVDDSNSMLPQIEDHKVGLTNSPSSSSPSDYCHLLPERFDSLETLFDVELKRMASFLGLEID 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2432g00036 266 CDD SANT 70 111 IPR001005 -
Gabi2432g00036 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Gabi2432g00036 266 MobiDBLite consensus disorder prediction 117 155 - -
Gabi2432g00036 266 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Gabi2432g00036 266 FunFam MYB-related transcription factor 12 65 - -
Gabi2432g00036 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Gabi2432g00036 266 FunFam Transcription factor TT2 69 140 - -
Gabi2432g00036 266 Gene3D - 70 144 - -
Gabi2432g00036 266 CDD SANT 15 60 IPR001005 -
Gabi2432g00036 266 Gene3D - 13 65 - -
Gabi2432g00036 266 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Gabi2432g00036 266 MobiDBLite consensus disorder prediction 168 187 - -
Gabi2432g00036 266 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
Gabi2432g00036 266 SMART sant 65 113 IPR001005 -
Gabi2432g00036 266 SMART sant 12 62 IPR001005 -
Gabi2432g00036 266 MobiDBLite consensus disorder prediction 133 153 - -
Gabi2432g00036 266 MobiDBLite consensus disorder prediction 117 132 - -
Gabi2432g00036 266 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Gabi2432g00036 266 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Gabi2432g00036 266 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2432g00036 Gabi-Chr2432 270172 271448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2432g00036 1 167 MYB Transcription Factor Family AT4G34990 48.889 1.77e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi2432g00036 Myb_DNA-binding 3.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2432g00036 K09422 - gmx:547568 372.089