Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2432g00022 ATGGAGGTGGAGGATTTTCTTGAGTATGAAAACAGTGAAATGCGTGTTGTTGCAGACACAGGGCAGAGTTTGGAATGCATATCGATTGAAAGATCATCTTCTGGGAAGCTTCGATTGGAATGCTCAGAAGGCACTGCGGATGCAGATTTGGGGAAACTAAATGCAAAATTTCAGTACATTGAGCAGATGTTGCAAAAGGTCAAACACGAAGAGAAACTTCGCTTAACGTGTGGATCTCCTATTCATTCTCCTGTAAATATAGACAGCCACTGTTCTGCTGATAAATTTCCTGTCATGGATGAGAAGGTTCAATCTGAAACTCCCCACCAGGAAATACCTTCTATAGCATCAAGTTTAAATTATACTCATAGTAATCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGATGGAGTGATAGAAAGTGGATCATCTGCTTCTGCTGTCTACTCGACTTTGATGCCTGATTTTTCAATGTTAGAAGGAGAAATATGCTTGGACAAGCTATCAATCAGAGAACTTCATGAATTGTTTAAGGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAAAGGAGGATTGCCATAAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATTGTTAAAGATAACAAAATAGTTAGAAAATGTGAAGAAGACAGTTCTGGAAATGTGAATGCTGCACCTGTAATCTCTATTGAAAATATGGCTGAAGATGATGTCAACTATAAGGATTCATCTGTAGTGGAGGGTTGTGGAATTGAGGACAACCAAGTTGTTTCTGAAACAAGACTGAGAAATCATAACATGGAACATGAATTGGGAGGTGAGGATCATCAAGCAGAACAAAGAGCTGCAAAAAGAATACGGAAGCCCACAAAGAGATATATTGAAGAACTCTCTGAAAGTGAATCTAGAGAGCACAACCCTAGGTTGTTAAGTTCTAATAGAAATATGGAACCTGGACATGTTTCTCCAACTTCATGCATCAGGCCTGCTAGGAATGCTTTTTCAGAGGTGAGAACATTTATCACCAGGTTAGATTCTCTTGGAGGTTCTAGTGTCCAAATTCCTTGTGTTTCTCGGATTCGAAGAAGTCGTCCAAGGAAAAATATCATGTCTCTTAAGAAATTCCATCCAACTGGCATGGGTGAAACTGAGAAATTCGGTAATAAGGTCCTTGGAGAGCATGGTTCTGATGATGGGAGTGAGAGTCCAGACAAAGTCTTGAAGCCAAGATCCACGCCTGGAAAGTTTTATCGGCCATCTTCTTCTGAACCTGGAAAAGAGAAGCAGTGTCAGGTAAAAGGCACGATCGAGCAACGTCAGGAATTGAGGCCAAAAAAGGCAGATCCATCTAATCATACTTCAGGTGAACATATAGTTAAAGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAACATCATCGAGCATGGACTCTTGTTGAGGTAATGAAATTAGTTGAAGGCGTGTCACGGTGTGGAGCAGGGCGGTGGTCTGAGATCAAACGACTCTCCTTTTCATCATACTCATATCGTACCTCTGTTGATCTTAAGGACAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCACAGACACCTGCAGATGAGGGGATAAATTCGCGGAAGCATGGTACAGCTCCCATTCCTGAGGCAATTTTAGTACGTGTAAGAGAGCTTGCAGAGATGAATTCTCAGGTACCTCCAAATTTCAGCTCAAGCAAGTTAACTGCTGGTGCAGGAAGTGTGCATGAAGATAGATCAGGGTACTTGTAG 1800 0.415 MEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGTADADLGKLNAKFQYIEQMLQKVKHEEKLRLTCGSPIHSPVNIDSHCSADKFPVMDEKVQSETPHQEIPSIASSLNYTHSNQSGSIDQCSRPSDGVIESGSSASAVYSTLMPDFSMLEGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAISLTNSCDVSATTFIVKDNKIVRKCEEDSSGNVNAAPVISIENMAEDDVNYKDSSVVEGCGIEDNQVVSETRLRNHNMEHELGGEDHQAEQRAAKRIRKPTKRYIEELSESESREHNPRLLSSNRNMEPGHVSPTSCIRPARNAFSEVRTFITRLDSLGGSSVQIPCVSRIRRSRPRKNIMSLKKFHPTGMGETEKFGNKVLGEHGSDDGSESPDKVLKPRSTPGKFYRPSSSEPGKEKQCQVKGTIEQRQELRPKKADPSNHTSGEHIVKVPTAKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFSSYSYRTSVDLKDKWRNLLKASFAQTPADEGINSRKHGTAPIPEAILVRVRELAEMNSQVPPNFSSSKLTAGAGSVHEDRSGYL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2432g00022 599 MobiDBLite consensus disorder prediction 398 416 - -
Gabi2432g00022 599 SMART sant 483 536 IPR001005 -
Gabi2432g00022 599 MobiDBLite consensus disorder prediction 574 599 - -
Gabi2432g00022 599 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 479 538 IPR017930 -
Gabi2432g00022 599 MobiDBLite consensus disorder prediction 388 478 - -
Gabi2432g00022 599 ProSiteProfiles Myb-like domain profile. 487 534 IPR001005 -
Gabi2432g00022 599 MobiDBLite consensus disorder prediction 306 321 - -
Gabi2432g00022 599 CDD SANT_TRF 485 535 - -
Gabi2432g00022 599 Pfam Myb-like DNA-binding domain 486 534 IPR001005 -
Gabi2432g00022 599 Gene3D - 474 580 - -
Gabi2432g00022 599 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 592 - -
Gabi2432g00022 599 MobiDBLite consensus disorder prediction 306 335 - -
Gabi2432g00022 599 SUPERFAMILY Homeodomain-like 481 542 IPR009057 -
Gabi2432g00022 599 MobiDBLite consensus disorder prediction 441 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2432g00022 Gabi-Chr2432 177922 185703 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi2432g00022 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2432g00022 - - gmx:100782501 920.613