Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2432g00015 ATGGAATATTCTTCTGCCAGAGCTTATCAAATAAAATATGTTGTATTTGCTTGTCTCTTGCTTCTTTTGAAATGGAAGGGTGTAGTACTGGCAAATAAAACAACAGTGGACAACGATTCTAAGGATCTAGTGGTGTCATTTTCTAGCTCTGCTCCTCAGATAAAGTATGATGTCTTTCTCAGCTTTAGAGGGGACGACACGCGTGAAGGTTTCCTCAGTCATTTGAACAAGAATTTACATCAAAAGCAGATTTTTACCTTTGTAGATGACAAGCTTCCCGTAGGGTGTGAAATATCGAAAGCTCTTCTTGAAGCAATTGAAAGATCATTGATTTCATTGGTCATATTCTCACAAAACTATGCTTCTTCATCTTGGTGTTTGCTAGAGCTAGTGAAAATAGTTGAGTGCAGGGAAAAAGATGGACAGATTGTGCTACCTGTTTTCTACAAAGTCGATCCCTCCCATGTACGGCATCAAAAGGGGGCTTATGAAAATGCATTTGCTGAACATGAAAAAAATTATAGTTTAAAGGTGCAAACCTGGAGATCTGCTTTGAAAGAAACTGCTAATTTAGCAGGATTTCATTCTTCAAATTTTCGGAATGAAGCTGAGCTTGCTGAAGAAATAGTTAAATGGGTACAGAAGAGATTGAAACATGTGGACAAAGTTAACTCAAAAGGACTTGTTGGAATTGCCAAACCAATTTCACATGTAGAATCATTGTTACGGTTAGATTCAGAAGATGTTCGTATTATTGGAATTTGGGGCATGGGTGGTGTTGGTAAGACAACAATTGCAGAAGAAGTATATTACAGATTGCATGCTGATTACGAAGGGTATTGTTTTCTGGCTAATGTAAGAGAGGAGTTGGGAAGACAGGGAATAATCTCTTTAAAGATAAAGCTTTTTTCCACACTACTAGGGGAACAAGATTTGAAAATTGAAACCCCAAATGTATTGCCTCCTTATGTTGAGAAAAGGCTTCGTCGTATGAAGGTTCTGATTGTTCTTGATGATATCAACTATTCGGAGCAACTAGAAATTTTAGTTGGGACACATGACAGGTTTAAAAATGGTAGTAGAATCATCATAACTACTAGAGATAAGCAAGTCCTTGCTAAAGGGGTTCATGGTATATACGAGGTTGAGGCACTGGACTTTGATGAGTCTCTCCGGCTTTTCAATTTGAATGCCTTTGAACATAATCATATTGATATAGAATACTACGAACTATCTAAGACGATGGTCAAGTATGCCGAAGGCATTCCATTAGTTCTTAAAGTTTGGGGTCATCTTCTTCGAGGAAAAAAAATAGAAATATGGGAAAGCCAATCAAAAAGGCTCAAAAAAGTGCCAAATAAAAAGGTTCATGATTTTATTAAAATTAGTATTGATGATGATCTTCATCATGATGAGAAGAAGATATTTTTGGATATTGCATGTTTTTTCGATGGATTGAATATGAATGTTGATAAAATAAAACTTTTATCAAAGGATCATGATTATTCTGTTGCTGCTGGGTTAGAAAGGTTACAAGATAAAGCTCTTATAACTATTTCTGAAGAGAATATTGTATCCATGCATGACATTATACAAGAAACCGCTTGGGAGATGGTTCGCCAAGAATCTATTGAAGACCCTGGTAACCGGAGTCGACTGTTGGATACTGATGACATTTATCAAGTACTGAAAAATAACAAGGGGAGTGAGGCCATTAGAAGCATAGTCCTCAACTCGTCGATGATTAAGGAGCTGCAGTTAAGCCCTCAAGTATTTGCTAAGATGAGCAAACTACAATTTCTTGATTTGTATTGTGATTGGCCTTATAAAGTGTTGTATCTTCCTCATGGGCTTGACTCTTTGCCAAATGAACTAAGATATCTTCGCTGGGCTTGCTACCCTTTGGAATCCTTGCCATCCATGTTTTCTGCGGAAAATCTTGTTGAATTGAACTTGCCCTACAGCCGAGTGAAAAAACTTTGGCACCAAGTGCAGGATCTTGAGAATTTAAACACCCTTGTACTGCATTCATCCACAAGCCTGGTGGAACTGCCAGACTTTTCAAAGGCCACAAATCTTAAAGTCATAGATCTCCGTTTTTGTGTAGAGCTGACTAGTGTGCATCCATCTGTTTTGTCAATCAACAAGCTTGAGAAATTGGACCTAGGTGGATGCATTTCCCTTACAAGCCTTGGAAGCAATATCCATCTGAGCTCCCTTCGCTATCTCTCCCTCTATGGCACGGGCATCAAACAACTACCCTCCTCTATTGCACTTCAAAGCAAACTTGAAAAGCTAAATCTAGCACGCACTTACATTGGGAACTTGCCTGCAAGCATCAAGCATCTTACAAAGCTTCGACATCTAGCTATACACCACTGTAGGGAGCTTCAGACTATACCAGAGCTTCCCCCATCGCTTGAAATGCTAGATGCCAGTGGCTGCATATCACTGGAGACTGTGTTGTTCCCTTCAACCGCTAGTGAACAACTGAATGAAAACAAGAAAAGGGTTGCCTTTTGGAATTGCTTGAAATTGGATGAACATTCTCTCAGGGCTATTGAGCTGAATGCGCAAGTTAACATGATGAAATTTGCATTCCAACATTTATCCATATTTGGTCGCAGTTATGATGCTCAAATCACTTATGTGGATCAGGAAAGCATAATTCAAGAGTGGTTGTTCTATCGAAAGACAACAAGTGACTTCCTACCTGTTAATGGGAAGACAACACGTGACTTCCTACCTGTTAATGGGAAGACAACACGTGACATCCTACCTGTTAACTTCCTTTTACCTCCGCATTCCCTTCTGTTGGGCTCCATTTTGCGCAGATCAACATGA 2844 0.3906 MEYSSARAYQIKYVVFACLLLLLKWKGVVLANKTTVDNDSKDLVVSFSSSAPQIKYDVFLSFRGDDTREGFLSHLNKNLHQKQIFTFVDDKLPVGCEISKALLEAIERSLISLVIFSQNYASSSWCLLELVKIVECREKDGQIVLPVFYKVDPSHVRHQKGAYENAFAEHEKNYSLKVQTWRSALKETANLAGFHSSNFRNEAELAEEIVKWVQKRLKHVDKVNSKGLVGIAKPISHVESLLRLDSEDVRIIGIWGMGGVGKTTIAEEVYYRLHADYEGYCFLANVREELGRQGIISLKIKLFSTLLGEQDLKIETPNVLPPYVEKRLRRMKVLIVLDDINYSEQLEILVGTHDRFKNGSRIIITTRDKQVLAKGVHGIYEVEALDFDESLRLFNLNAFEHNHIDIEYYELSKTMVKYAEGIPLVLKVWGHLLRGKKIEIWESQSKRLKKVPNKKVHDFIKISIDDDLHHDEKKIFLDIACFFDGLNMNVDKIKLLSKDHDYSVAAGLERLQDKALITISEENIVSMHDIIQETAWEMVRQESIEDPGNRSRLLDTDDIYQVLKNNKGSEAIRSIVLNSSMIKELQLSPQVFAKMSKLQFLDLYCDWPYKVLYLPHGLDSLPNELRYLRWACYPLESLPSMFSAENLVELNLPYSRVKKLWHQVQDLENLNTLVLHSSTSLVELPDFSKATNLKVIDLRFCVELTSVHPSVLSINKLEKLDLGGCISLTSLGSNIHLSSLRYLSLYGTGIKQLPSSIALQSKLEKLNLARTYIGNLPASIKHLTKLRHLAIHHCRELQTIPELPPSLEMLDASGCISLETVLFPSTASEQLNENKKRVAFWNCLKLDEHSLRAIELNAQVNMMKFAFQHLSIFGRSYDAQITYVDQESIIQEWLFYRKTTSDFLPVNGKTTRDFLPVNGKTTRDILPVNFLLPPHSLLLGSILRRST 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2432g00015 947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56 818 IPR044974 GO:0006952
Gabi2432g00015 947 Gene3D - 384 462 IPR042197 -
Gabi2432g00015 947 FunFam Disease resistance protein (TIR-NBS-LRR class) 52 219 - -
Gabi2432g00015 947 SUPERFAMILY "Winged helix" DNA-binding domain 455 564 IPR036390 -
Gabi2432g00015 947 SMART till_3 55 191 IPR000157 GO:0007165
Gabi2432g00015 947 Pfam NB-ARC domain 241 452 IPR002182 GO:0043531
Gabi2432g00015 947 Gene3D - 463 537 IPR036388 -
Gabi2432g00015 947 Gene3D - 215 378 IPR027417 -
Gabi2432g00015 947 ProSiteProfiles TIR domain profile. 54 217 IPR000157 GO:0007165
Gabi2432g00015 947 SUPERFAMILY Toll/Interleukin receptor TIR domain 48 194 IPR035897 -
Gabi2432g00015 947 Pfam TIR domain 55 229 IPR000157 GO:0007165
Gabi2432g00015 947 Gene3D Ribonuclease Inhibitor 732 852 IPR032675 -
Gabi2432g00015 947 Gene3D Ribonuclease Inhibitor 560 731 IPR032675 -
Gabi2432g00015 947 PRINTS Disease resistance protein signature 712 728 - -
Gabi2432g00015 947 PRINTS Disease resistance protein signature 419 433 - -
Gabi2432g00015 947 PRINTS Disease resistance protein signature 251 266 - -
Gabi2432g00015 947 PRINTS Disease resistance protein signature 327 341 - -
Gabi2432g00015 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 479 IPR027417 -
Gabi2432g00015 947 SUPERFAMILY L domain-like 575 850 - -
Gabi2432g00015 947 Gene3D - 53 214 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2432g00015 Gabi-Chr2432 115144 120124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2432g00015 47 827 WRKY Transcription Factor Family AT4G12020 34.128 1.56e-111 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2432g00015 - - gmx:100802823 1204.5