Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2432g00001 ATGATGGGTGCCTCCGATTTTCCGGCAAGGTTCAAACTTTCCGTCGCCGGCGTTGAGATTGCTGGTTTTTCCGGCTGTACAGTTAGGATTGTAGATGGTGTATGCTGGAAAGTGTTGTTGAAGGAAAAATCAGATTTTGATTCTGGGTTTGTGGTGGGGTATTTTGTTGGTGGTGATTTTGAGAAGGTGGCGAAAATGAGCATGAGTGTGACCGAGGAAGAATCGGGTGAAAAGGTTTATCTCCCGGCCGAAATTGATTGGAAAATGCTTGATAAATCCAAGTTTTTCTTCCTTGGAGCTGCCCTCTTCTCTGGGGTTTCTGCTACCTTGTACCCTGTTGTTGTGTTGAAAACCAGGCAGCAAGTGGCTCAGTCCCAAGTTTCTTGCATCAAGACTGCATTTTCATTGATTAGGGGTGAGGGTTTTAGAGCATTGTACCGCGGATTTGGGACTTCTTTGATGGGTACAATCCCTGCTAGAGCTTTATATATGGCTGCCTTGGAGGTTACCAAGAGTAATGTGGGGACTTCTACGGTTAGGTTTGGTATTGGAGAACCTACAGCTGCGGCAATTGCCAATGCAGTTGCTGGCTTGAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCAATTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGATGGTTATAATTCCAGTAATCCTAAGGCTTCAGCTTGTCGATATGTCAATGGGATTGATGCCTTCCGGAAAATTCTTAGCACAGATGGCCCTAGGGGCTTGTATAGAGGTTTTGGGATATCAATCTTGACCCATGCACCTTCCAATGCAGTTTGGTGGGCTTCATATTCTCTTGCACAAAGGATGGTTTGGGGTGGAGTTGGTGCTAGTGCTAATGCTTTGAGGCCAGATACAAAAACAGTAATGGCAGTTCAGGGACTCAGTGCAGCAATGGCTGGTGGCATGTCTGCTTTGATTACCATGCCACTGGATACAATCAAGACAAGACTGCAAGTCTTGGATGGTGATGAGAATGGCCGTCGCGGACCAACAGTTATGCAGACGGTGAGGAGTCTGGTTAAGGAAGGTGGCTGGATGGCTTGTTACAGAGGATTGGGACCTCGATGGGCTTCAATGTCAATGTCTGCAACGACAATGATCACAACCTATGAGTTCCTAAAAAGGCTTTCCGCAAAGAATCAAGAGGTTTTGACATGA 1200 0.4667 MMGASDFPARFKLSVAGVEIAGFSGCTVRIVDGVCWKVLLKEKSDFDSGFVVGYFVGGDFEKVAKMSMSVTEEESGEKVYLPAEIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIRGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTSTVRFGIGEPTAAAIANAVAGLSAAMAAQLVWTPIDVVSQRLMVQDGYNSSNPKASACRYVNGIDAFRKILSTDGPRGLYRGFGISILTHAPSNAVWWASYSLAQRMVWGGVGASANALRPDTKTVMAVQGLSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2432g00001 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 301 390 IPR018108 -
Gabi2432g00001 399 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Gabi2432g00001 399 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Gabi2432g00001 399 PRINTS Mitochondrial carrier protein signature 96 109 IPR002067 GO:0055085
Gabi2432g00001 399 PRINTS Mitochondrial carrier protein signature 310 332 IPR002067 GO:0055085
Gabi2432g00001 399 Gene3D Mitochondrial carrier domain 95 397 IPR023395 -
Gabi2432g00001 399 Pfam Mitochondrial carrier protein 304 394 IPR018108 -
Gabi2432g00001 399 Pfam Mitochondrial carrier protein 190 284 IPR018108 -
Gabi2432g00001 399 Pfam Mitochondrial carrier protein 102 174 IPR018108 -
Gabi2432g00001 399 SUPERFAMILY Mitochondrial carrier 88 387 IPR023395 -
Gabi2432g00001 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 91 173 IPR018108 -
Gabi2432g00001 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 283 IPR018108 -
Gabi2432g00001 399 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 74 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2432g00001 Gabi-Chr2432 4259 6067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2432g00001 66 396 Chloroplast and Mitochondria Gene Families AT1G72820 71.884 2.11e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2432g00001 K15121 - gmx:100784616 563.533